LOCUS BC067262 2907 bp mRNA linear HUM 30-MAR-2004 DEFINITION Homo sapiens Rho guanine nucleotide exchange factor (GEF) 1, mRNA (cDNA clone MGC:74807 IMAGE:6502165), complete cds. ACCESSION BC067262 VERSION BC067262.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2907) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2907) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (12-MAR-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield, Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin, Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu, Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 141 Row: i Column: 17 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 15011971. FEATURES Location/Qualifiers source 1..2907 /db_xref="H-InvDB:HIT000262507" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:74807 IMAGE:6502165" /tissue_type="Uterus, leiomyosarcoma" /clone_lib="NIH_MGC_71" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2907 /gene="ARHGEF1" /gene_synonym="GEF1" /gene_synonym="LBCL2" /gene_synonym="P115-RHOGEF" /gene_synonym="SUB1.5" /db_xref="GeneID:9138" /db_xref="MIM:601855" CDS 8..2854 /gene="ARHGEF1" /gene_synonym="GEF1" /gene_synonym="LBCL2" /gene_synonym="P115-RHOGEF" /gene_synonym="SUB1.5" /codon_start=1 /product="ARHGEF1 protein" /protein_id="AAH67262.1" /db_xref="GeneID:9138" /db_xref="MIM:601855" /translation="MASLSTWSSPAEPREMEDFARGAASPGPSRPGLVPVSIIGAEDE DFENELETNSEEQNSQFQSLEQVKRRPAHLMALLQHVALQFEPGPLVLRVPVPPNVAF ELDRTRADLISEDVQRRFVQEVVQSQQVAVGRQLEDFRSKRLMGMTPWEQELAQLEAW VGRDRASYEARERHVAERLLMHLEEMQHTISTDEEKSAAVVNAIGLYMRHLGVRTKSG DKKSGRNFFRKKVMGNRRSDEPAKTKKGLSSILDAARWNRGEPQVPDFRHLKAEVDAE KPGATDRKGGVGMPSRDRNIGAPGQDTPGVSLHPLSLDSPDREPGADAPLELGDSSPQ GPMSLESLAPPESTDEGAETESPEPGDEGEPGRSGLELEPEEPPGWRELVPPDTLHSL PKSQVKRQEVISELLVTEAAHVRMLRVLHDLFFQPMAECLFFPLEELQNIFPSLDELI EVHSLFLDRLMKRRQESGYLIEEIGDVLLARFDGAEGSWFQKISSRFCSRQSFALEQL KAKQRKDPRFCAFVQEAESRPRCRRLQLKDMIPTEMQRLTKYPLLLQSIGQNTEEPTE REKVELAAECCREILHHVNQAVRDMEDLLRLKDYQRRLDLSHLRQSSDPMLSEFKNLD ITKKKLVHEGPLTWRVTKDKAVEVHVLLLDDLLLLLQRQDERLLLKSHSRTLTPTPDG KTMLRPVLRLTSAMTREVATDHKAFYVLFTWDQEAQIYELVAQTVSERKNWCALITET AGSLKVPAPASRPKPRPSPSSTREPLLSSSENGNGGRETSPADARTERILSDLLPFCR PGPEGQLAATALRKGVGGGILPPETPPVSAWGELCPPAWLHLRFPPRKAFCKKERNGG EDVRDHPHPHSCRSISHPEGLRRGSCGPRLGGAQLGLLAPHEPRPSLPPALCLGDSGL HSGGHHGDPGHLSIACGGHPSTPTPKCLRSVFIP" misc_feature 1211..1765 /gene="ARHGEF1" /gene_synonym="GEF1" /gene_synonym="LBCL2" /gene_synonym="P115-RHOGEF" /gene_synonym="SUB1.5" /note="RhoGEF; Region: Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases" /db_xref="CDD:smart00325" BASE COUNT 596 a 910 c 919 g 482 t ORIGIN 1 ggcggcgatg gcttctcttt ccacctggag cagccctgca gagcccaggg agatggaaga 61 cttcgcccga ggggcggcct ccccaggccc ctcccggcct ggcctggttc ccgtcagcat 121 catcggggct gaggatgagg attttgagaa cgagctggag acaaactcag aagagcaaaa 181 cagccagttc cagagcctgg agcaggtgaa gcggcgccca gcccacctca tggccctcct 241 gcagcacgtg gccctgcagt ttgagccagg acccctggtt ctccgggtgc cggtccctcc 301 caacgtcgcc tttgaacttg accgcactag ggctgacctc atctccgagg atgtccagcg 361 gcggttcgtg caggaggtgg tgcaaagcca gcaggtagcc gtgggccggc agctggagga 421 cttccgttcc aagcggctca tgggcatgac gccctgggag caggagctgg cccagctgga 481 ggcttgggtt gggcgggacc gagccagcta cgaggcccgg gagcggcacg tggcggagcg 541 gctgctcatg cacctggagg agatgcaaca taccatctct accgacgaag aaaagagtgc 601 tgccgtggtc aacgccattg gcctgtacat gcgccacctt ggggtgcgga ccaagagtgg 661 agacaagaag tcggggagga acttcttccg gaaaaaggtg atggggaacc ggcggtcgga 721 cgagcctgcc aagaccaaga aggggctgag cagcatcctg gatgccgccc gctggaaccg 781 gggagagccc caggttccag attttcgaca cctcaaagca gaggttgatg ccgagaagcc 841 aggtgctaca gaccggaagg gaggcgtggg gatgccctct cgggaccgga atatcggggc 901 tcctgggcag gacacccctg gagtctctct gcaccctctg tccctggaca gcccagaccg 961 ggaaccaggt gctgacgccc ccctggagct gggggactca tccccgcagg gcccaatgag 1021 cctggagtcc ttggcgcccc cagagagtac cgacgagggg gccgaaaccg agagccccga 1081 gcctggagat gagggggagc cggggcggtc gggactggag cttgaaccag aagagcctcc 1141 cggctggcgg gaactcgtcc ccccagacac cctgcacagc ctgcccaaga gccaggtgaa 1201 gcggcaggag gtcatcagcg agctgctggt gacagaggcg gcccacgtgc gcatgctgcg 1261 ggtgctgcac gacctcttct tccagcccat ggcagaatgc ctgttcttcc ccttggagga 1321 gctgcagaac atcttcccca gcctggacga gctcatcgag gtgcattccc tgttcctcga 1381 tcgcctgatg aagcggaggc aggagagtgg ctacctcatc gaggagatcg gagacgtgct 1441 gctggcccgg tttgatggtg ctgagggctc ctggttccag aaaatctcct cccgcttctg 1501 cagccgccag tcatttgcct tagagcagct caaagccaag caacgcaagg accctcggtt 1561 ctgtgccttc gtgcaggaag ctgagagccg cccgcggtgc cgccgcctgc agctgaagga 1621 catgatcccc acggagatgc agcggctgac caagtacccc ctgctcctgc agagcatcgg 1681 gcagaacaca gaagagccca cagaacggga gaaagtggag ctggcagccg agtgctgccg 1741 ggaaattcta caccacgtca accaagccgt gcgtgacatg gaggacctgc tgaggctcaa 1801 ggactatcag cggcgcctgg acttgtccca ccttcggcag agcagcgacc ctatgctgag 1861 cgagttcaag aacctggaca tcaccaagaa gaaattggtc cacgagggcc cactgacgtg 1921 gcgggtgact aaggacaagg cagtggaggt gcatgtgctg ctgctggacg acctgctgct 1981 gctgctccag cgccaggacg agcggctgct gctcaagtcc catagccgga cactgacgcc 2041 cacgcccgat ggcaagacca tgctgcggcc cgtgctgcgg ctcacctccg ccatgacccg 2101 cgaggtggcc accgatcaca aagccttcta cgtccttttt acctgggacc aggaggccca 2161 gatatacgag ctggtggcac agactgtgtc ggagcggaaa aactggtgtg ctctcatcac 2221 tgagactgcc ggatccctga aagtccctgc ccctgcctct cgccctaagc cccggcccag 2281 cccgagcagc acccgagaac ccctcctcag cagctctgag aacggcaatg gtggccgaga 2341 gacgtctcca gctgatgccc ggaccgagag aatcctcagt gacctcctgc ccttctgcag 2401 accaggcccc gagggccagc tcgctgccac ggcccttcgg aaaggagttg gaggaggaat 2461 tttgccgcct gagacccctc ctgtctcagc ttggggggaa ctctgtcccc cagcctggct 2521 gcacttgagg ttcccgccca ggaaggcctt ttgcaagaag gagaggaatg ggggagagga 2581 cgtgagggac cacccccacc cacacagctg ccgcagcatc tcacaccccg agggcctgag 2641 gagagggagc tgtgggccac gcctgggagg ggcccagctg gggttactgg ccccgcatga 2701 gcctcggcca tctctccctc ctgccctctg cttgggggac tcagggctcc attctggagg 2761 gcaccacggt gacccgggcc atctcagtat tgcctgtggg ggccacccct ccacccccac 2821 ccccaagtgc cttcgctctg tttttatacc ctgaattgga ggtttatttt ttaatatata 2881 ttatctaaga agaaaaaaaa aaaaaaa //