LOCUS BC067085 2009 bp mRNA linear HUM 06-JUN-2006 DEFINITION Homo sapiens huntingtin interacting protein 1 related, mRNA (cDNA clone MGC:71280 IMAGE:6085487), complete cds. ACCESSION BC067085 VERSION BC067085.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2009) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2009) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (08-MAR-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 50 Row: k Column: 17 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 48762941. FEATURES Location/Qualifiers source 1..2009 /db_xref="H-InvDB:HIT000262420" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:71280 IMAGE:6085487" /tissue_type="Pancreas, ductal carcinoma" /clone_lib="NIH_MGC_110" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2009 /gene="HIP1R" /gene_synonym="FLJ14000" /gene_synonym="HIP12" /gene_synonym="HIP3" /gene_synonym="ILWEQ" /gene_synonym="KIAA0655" /db_xref="GeneID:9026" /db_xref="HGNC:HGNC:18415" /db_xref="MIM:605613" CDS 63..1910 /gene="HIP1R" /gene_synonym="FLJ14000" /gene_synonym="HIP12" /gene_synonym="HIP3" /gene_synonym="ILWEQ" /gene_synonym="KIAA0655" /codon_start=1 /product="HIP1R protein" /protein_id="AAH67085.1" /db_xref="GeneID:9026" /db_xref="HGNC:HGNC:18415" /db_xref="MIM:605613" /translation="MNSIKNVPARVLSRRPGHSLEAEREQFDKTQAISISKAINTQEA PVKEKHARRIILGTHHEKGAFTFWSYAIGLPLPSSSILSWKFCHVLHKVLRDGHPNVL HDCQRYRSNIREIGDLWGHLHDRYGQLVNVYTKLLLTKISFHLKHPQFPAGLEVTDEV LEKAAGTDVNNIFQLTVEMFDYMDCELKLSESVFRQLNTAIAVSQMSSGQCRLAPLIQ VIQDCSHLYHYTVKLLFKLHSCLPADTLQGHRDRFHEQFHSLRNFFRRASDMLYFKRL IQIPRLPEGPPNFLRASALAEHIKPVVVIPEEAPEDEEPENLIEISTGPPAGEPVVVA DLFDQTFGPPSGSVKDDRDLQIESLKREVEMLRSELEKIKLEAQRYIAQLKSQVNALE GELEEQRKQKQKALVDNEQLRHELAQLRAAQLEGERSQGLREEAERKASATEARYNKL KEKHSELVHVHAELLRKNADTAKQLTVTQQSQEEVARVKEQLAFQVEQVKRESELKLE EKSDQLEKLKRELEAKAGELARAQEALSHTEQSKSELSSRLDTLSAEKDALSGAVRQR EADLLAAQSLVRETEAALSREQQRSSQEQGELQGRLAERVWPPQMQQHH" BASE COUNT 466 a 578 c 658 g 307 t ORIGIN 1 ccggaccgtg aggctgtgag tcgcgcggac ggagccggac aaaagcgggc ggcggcggca 61 ggatgaacag catcaagaac gtgccggcgc gggtgctgag ccgcaggccg ggccacagcc 121 tggaggccga gcgcgagcag ttcgacaaga cccaggccat cagcatcagc aaagccatca 181 acacccagga ggcccccgtg aaggagaagc acgcccggcg catcattctg ggcacacacc 241 acgagaaggg ggctttcacc ttctggtcct atgccattgg gctgccgctg cccagcagct 301 ccattctcag ctggaagttc tgccacgtcc tccacaaggt ccttcgagac gggcacccca 361 atgtgctgca tgactgccag cggtaccgca gcaacatccg ggagattgga gacctgtggg 421 gacatttgca tgaccgctac ggacagctgg tgaatgtcta caccaagctg ctgctgacca 481 agatctcctt ccacctcaag catccccagt ttcccgcggg cctggaggtg acagatgagg 541 tactggagaa ggcagctggg accgatgtca acaacatctt ccagctcact gtggagatgt 601 ttgattacat ggattgtgag ctgaagcttt ctgaatcagt tttccgacag ctcaacacgg 661 ccatcgccgt atcccagatg tcctcaggcc agtgccgcct ggcccccctc atccaggtca 721 tccaggactg cagccacctc taccactaca cggtcaagct cctgttcaag ctacactctt 781 gtctccctgc ggacaccctg caaggccaca gggaccggtt ccacgagcag tttcacagcc 841 tcaggaactt cttccgcaga gcctccgaca tgctgtactt caagcggctc atccagatcc 901 cccggctgcc cgagggaccc cctaacttcc tgcgggcctc agccctggct gagcacatca 961 agccggtggt ggtgatcccc gaggaggccc cggaagatga ggagccggag aatctcattg 1021 agatcagcac agggcccccc gcgggggagc cagtggtggt ggctgacctc ttcgatcaga 1081 cgtttggacc ccccagtggg tctgtgaagg acgacaggga cctccagatt gagagcttga 1141 agagagaggt ggaaatgctc cgctctgaac tggagaagat caagctggag gcccagcggt 1201 acatcgcgca gctgaagagc caggtgaatg cactggaggg tgagctggag gagcagcgga 1261 agcagaagca gaaggccctg gtggataatg agcagctccg ccacgagctg gcccagctga 1321 gggctgccca gctggagggc gagcggagcc agggcctgcg tgaggaggct gagaggaagg 1381 ccagtgccac ggaggcgcgc tacaacaagc tgaaggaaaa gcacagtgag ctcgtccatg 1441 tgcacgcgga gctgctcaga aagaacgcgg acacagccaa gcagctgacg gtgacgcagc 1501 aaagccagga ggaggtggcg cgggtgaagg agcagctggc cttccaggtg gagcaggtga 1561 agcgggagtc ggagttgaag ctagaggaga agagcgacca gctggagaag ctcaagaggg 1621 agctggaggc caaggccgga gagctggccc gcgcgcagga ggccctgagc cacacagagc 1681 agagcaagtc ggagctgagc tcacggctgg acacgctgag tgcggagaag gatgctctga 1741 gtggagctgt gcggcagcgg gaggcagacc tgctggcggc gcagagcctg gtgcgcgaga 1801 cagaggcggc gctgagccgg gagcagcagc gcagctccca ggagcagggc gagttgcagg 1861 gccggctggc agagagggta tggcctcccc agatgcagca gcaccactga gttcactgcc 1921 gtctggcaac catcgatctg tctccgtcat ctgcctgttc tagagatttc atgtaaacgg 1981 gatcatacac gaaaaaaaaa aaaaaaaaa //