LOCUS BC066952 1895 bp mRNA linear HUM 19-MAR-2009 DEFINITION Homo sapiens neurofilament, light polypeptide, mRNA (cDNA clone MGC:87388 IMAGE:5264373), complete cds. ACCESSION BC066952 VERSION BC066952.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1895) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1895) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-MAR-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 167 Row: k Column: 15 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 5453761 The stop codon of the CDS annotated on this record is located > 55 bases upstream of a splice junction, and therefore the mRNA is predicted to be subject to nonsense-mediated mRNA decay (NMD). FEATURES Location/Qualifiers source 1..1895 /db_xref="H-InvDB:HIT000262372" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:87388 IMAGE:5264373" /tissue_type="Brain, hippocampus" /clone_lib="NIH_MGC_95" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..1895 /gene="NEFL" /gene_synonym="CMT1F" /gene_synonym="CMT2E" /gene_synonym="NF-L" /gene_synonym="NF68" /gene_synonym="NFL" /db_xref="GeneID:4747" /db_xref="HGNC:HGNC:7739" /db_xref="MIM:162280" CDS 98..952 /gene="NEFL" /gene_synonym="CMT1F" /gene_synonym="CMT2E" /gene_synonym="NF-L" /gene_synonym="NF68" /gene_synonym="NFL" /codon_start=1 /product="NEFL protein" /protein_id="AAH66952.1" /db_xref="GeneID:4747" /db_xref="HGNC:HGNC:7739" /db_xref="MIM:162280" /translation="MSSFSYEPYYSTSYKRRYVETPRVHISSVRSGYSTARSAYSSYS APVSSSLSVRRSYSSSSGSLMPSLENLDLSQVAAISNDLKSIRTQEKAQLQDLNDRFA SFIERVHELEQQNKVLEAELLVLRQKHSEPSRFRALYEQEIRDLRLAAEDATNEKQAL QGEREGLEETLRNLQARYEEEVLSREDAEGRLMEARKGAKNTDAVRAAKDEVSESRRL LKAKTLEIEACRGMNEALEKQLQELEDKQNADISVMQDTINKLENELRTTKSEMARYL KEYQDLLT" BASE COUNT 531 a 502 c 523 g 339 t ORIGIN 1 gcacacagcc atccatcctc ccccttccct ctctcccctg tcctctctct cagggctccc 61 accgccgccg cgggccgggg agccaccggc cgccaccatg agttccttca gctacgagcc 121 gtactactcg acctcctaca agcggcgcta cgtggagacg ccccgggtgc acatctccag 181 cgtgcgcagc ggctacagca ccgcacgctc agcttactcc agctactcgg cgccggtgtc 241 ttcctcgctg tccgtgcgcc gcagctactc ctccagctct ggatcgttga tgcccagtct 301 ggagaacctc gacctgagcc aggtagccgc catcagcaac gacctcaagt ccatccgcac 361 gcaggagaag gcgcagctcc aggacctcaa tgaccgcttc gccagcttca tcgagcgcgt 421 gcacgagctg gagcagcaga acaaggtcct ggaagccgag ctgctggtgc tgcgccagaa 481 gcactccgag ccatcccgct tccgggcgct gtacgagcag gagatccgcg acctgcgcct 541 ggcggcggaa gatgccacca acgagaagca ggcgctccag ggcgagcgcg aagggctgga 601 ggagaccctg cgcaacctgc aggcgcgcta tgaagaggag gtgctgagcc gcgaggacgc 661 cgagggccgg ctgatggaag cgcgcaaagg cgccaagaac accgacgccg tgcgcgccgc 721 caaggacgag gtgtccgaga gccgtcgtct gctcaaggcc aagaccctgg aaatcgaagc 781 atgccggggc atgaatgaag cgctggagaa gcagctgcag gagctggagg acaagcagaa 841 cgccgacatc agcgttatgc aggacacgat caacaaatta gaaaatgaat tgaggaccac 901 aaagagtgaa atggcacgat acctaaaaga ataccaagac ctcctaacgt gaagatggct 961 ttggatattg agattgcagc ttacaggaaa ctcttggaag gcgaggagac ccgactcagt 1021 ttcaccagcg tgggaagcat aaccagtggc tactcccaga gctcccaggt ctttggccga 1081 tctgcctacg gcggtttaca gaccagctcc tatctgatgt ccacccgctc cttcccgtcc 1141 tactacacca gccatgtcca agaggagcag atcgaagtgg aggaaaccat tgaggctgcc 1201 aaggctgagg aagccaagga tgagcccccc tctgaaggag aagccgagga ggaggagaag 1261 gacaaggaag aggccgagga agaggaggca gctgaagagg aagaagctgc caaggaagag 1321 tctgaagaag caaaagaaga agaagaagga ggtgaaggtg aagaaggaga ggaaaccaaa 1381 gaagctgaag aggaggagaa gaaagttgaa ggtgctgggg aggaacaagc agctaagaag 1441 aaagattgaa cccccatttc cttaattatt tcaggaataa ttctcccgaa atcaggtcaa 1501 ccccatcacc aaccaaccaa ccagttgagt tccagattct atgtgaatta aaaagtcaat 1561 atatgtataa ttctgagatg acttaggttg gacattcaat gttgtgctat gaatttcctc 1621 tttatgcaga gtatctgttt gcttgcagag tggctttctg gcttgctgcc agcctgtgca 1681 tggtccacgc ttatgagttc aggatctacg gcaatgtgaa tcattcagat gtttacaata 1741 aaaaacacca catgagtaaa tgaattcact aatgttaatg ttaaacttca tggaaaaata 1801 gtcctttgaa ccttcggtgg ttagcaatta aagaccctga gttatgtgca ataaatagta 1861 aataaagtta taccgaacga aaaaaaaaaa aaaaa //