LOCUS BC066936 2325 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens coiled-coil domain containing 121, mRNA (cDNA clone
MGC:87264 IMAGE:4375206), complete cds.
ACCESSION BC066936
VERSION BC066936.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2325)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2325)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 167 Row: b Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 39979625.
FEATURES Location/Qualifiers
source 1..2325
/db_xref="H-InvDB:HIT000262357"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87264 IMAGE:4375206"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2325
/gene="CCDC121"
/gene_synonym="FLJ13646"
/gene_synonym="FLJ43364"
/db_xref="GeneID:79635"
/db_xref="HGNC:HGNC:25833"
CDS 154..990
/gene="CCDC121"
/gene_synonym="FLJ13646"
/gene_synonym="FLJ43364"
/codon_start=1
/product="coiled-coil domain containing 121"
/protein_id="AAH66936.1"
/db_xref="GeneID:79635"
/db_xref="HGNC:HGNC:25833"
/translation="MTDLNKHIKQAQTQRKQLLEESRELHREKLLVQAENRFFLEYLT
NKTEEYTEQPEKVWNSYLQKSGEIERRRQESASRYAEQISVLKTALLQKENIQSSLKR
KLQAMRDIAILKEKQEKEIQTLQEETKKVQAETASKTREVQAQLLQEKRLLEKQLSEP
DRRLLGKRKRRELNMKAQALKLAAKRFIFEYSCGINRENQQFKKELLQLIEQAQKLTA
TQSHLENRKQQLQQEQWYLESLIQARQRLQGSHNQCLNRQDVPKTTPSLPQGTKSRIN
PK"
BASE COUNT 815 a 420 c 457 g 633 t
ORIGIN
1 ggaacgaaaa ccaccacagc gtcagaaagg agcgggtttg ctgagggccc cagaaggctc
61 cttccaccgt atcatagtct aataaataat tttgtcaagc cagagaagct aacaaaggta
121 gagacaaggc ttaaagaaaa gatagtggcg gaaatgacgg atctgaacaa gcatataaaa
181 caagctcaaa cccagcggaa acagctactg gaggaatcca gggagctaca ccgagaaaag
241 ttacttgtcc aggctgaaaa cagattcttt ctggaatacc tgactaacaa aactgaagag
301 tacacagagc aacctgagaa ggtatggaac agctatttac aaaaaagtgg agagattgaa
361 cgaagaagac aagaatcagc ctccagatat gcagaacaaa tttcagtgct taaaacagcg
421 ctcttgcaaa aggaaaatat ccaatccagt ttgaagcgga agttgcaggc aatgagggac
481 attgctatat taaaggaaaa gcaggagaaa gaaatacaga cattacagga ggagacaaag
541 aaagtccaag ctgagacagc ttcaaagaca cgggaagtac aggcccagct cctccaggag
601 aaaagattac tggagaaaca actgagcgag ccagacagga ggctactggg aaagagaaaa
661 agaagagagc ttaatatgaa ggcccaggcc ttgaagttgg cagcaaagcg gtttattttt
721 gaatactcct gtggcatcaa cagagagaac cagcagttca agaaggaatt actgcagcta
781 attgagcaag cccagaaact aacggctact caaagccact tagaaaacag gaagcagcag
841 ctgcagcagg aacagtggta tctggagtcc ttaatccagg cgaggcagag actgcaagga
901 agtcataatc agtgcctaaa tagacaggat gttccaaaga ccacacccag tcttccccaa
961 ggcaccaaat caaggattaa tccaaagtaa cttctaaaat aacactgatt aaataagaac
1021 tggagcaagt actcttaagt gctacattaa cctggttaga aaggctgttg gattccagat
1081 tgctattgta aaatctccat catgatgtgt tggagtgaag gattagatgg ttttatccaa
1141 cagtcctact agatatttgg taaccagctt cccttaacta gctttttctt taaatactcg
1201 ttaataagct attccacaaa cctccagtta acctaacaca tgaccctaac ctagccattt
1261 accatacatc aaactagcta aaggaaacca acctaaggaa gtgaaaacag ttgtgattta
1321 tttcatctag ctaaattgta tttctttata gagaaagtac ctttaaggat agcattccaa
1381 atagactttg aatagcgttc tgccagttta tcctcattcc ttttgaccaa cttagcagac
1441 aaaagcagtt tttacaagct ctttgtgagt ttgtgccagt gaccaggtag ctccttctat
1501 tcttctcatg agtgaaaaag cattctgata acagcaagtc cagtaagtgc taggcagagt
1561 gacctttcat ctgatgctaa gcccctacaa gtttgagaag gtaagaaaag atgaaggaga
1621 catatattag gtcagctctt acttttgaaa atgttttatt tgaagaaaca cctgtagcat
1681 tgaggtgact gaatgcctcc acttatttca ggaaaacgta tccaaaaaaa gttgaaatat
1741 ttggacaact ttttttttaa gtgccatcga tttccctagc agcattctaa aagatagcaa
1801 gtaaaatgat gtttgttatc ctaaatgctt tagttttagg tcatttatta attttcttac
1861 aggtgcactt tctagtacat gaagtatcct ttgtaattaa tgtgtgccat atgtttattc
1921 ccatttagta taactataaa ttatatttta aattatatat ttttaggata gttatatttt
1981 ttttgggttc tacgacattg aagttggact agtgatttat ttgaatgctg aatcctagta
2041 taggggaata taatcttata ttttaacagg ggtcctctat gggaaaatag gatgaacttt
2101 gtttcccaga aattgttaag tgatgaaaaa cttcaaaata attttcctgc attttctgct
2161 ttatttacat gtaaagtgaa ttccctgaaa attggattta aaaagcattc tccttcaatg
2221 tgcctttacc ttgtagcttt aacaactttt ctgttaaata tgtagttttt tattaaacaa
2281 tgttattaaa taaaaacatt tatccaccga aaaaaaaaaa aaaaa
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