LOCUS BC066297 1239 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens NOL1/NOP2/Sun domain family, member 5C, mRNA (cDNA
clone IMAGE:4797351), with apparent retained intron.
ACCESSION BC066297
VERSION BC066297.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1239)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1239)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-FEB-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 167 Row: c Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 23200005
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..1239
/db_xref="H-InvDB:HIT000262188"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4797351"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 247 a 385 c 360 g 247 t
ORIGIN
1 ggcgggcgtg gagagccgcc agggctctat caaggggctg gtgtactcca gcaacttcca
61 gcctcgatga cttacgagcc ctcaagggga agcattttct cctggacccc ttgatgccgg
121 agctgctggt gtttcccgcc cagacagatc tgcatgaaca cccactgtac cgggccggac
181 acctcattct gcaggacagg gccagctgtc tcccagccat gctgctggac ccccgccagg
241 ctcccatgtc atggatgcct gtgccacccc aggcaataaa gaccagtcac ttggctgctc
301 ttctgaagaa ccaagggaag atctttgcct ttgacctggg tgccaggcgg ctggcatcca
361 tggccacgct gctggcctgg gctggcgtct cctgctgtga gctggctgag gaggacttcc
421 tggcggtctc ccccttagat ccgcgctatc gtgaggtcca ctatgtcctg ctggatcctt
481 cctgcagtgg ctcgggtgag atggtatgcc gagcagacag ctggaggagc ccggggcagg
541 gacacctagc ccggtgcgtc tgcatgccct ggcagggttc cagcagcgag ccctgtgcca
601 cgcgctcact ttcccttccc tgcagcggct cgtctactcc atgtgctccc tctgccagga
661 ggagaatgaa gacatggtac aagatgcgct gcagcagaac ccgggcgcct tcaggctagc
721 tcccgccctg cctgcccggc cccaccgagg cctgagcacg ttcccgggtg ccgagcactg
781 cctccgggct tcccccaaga ccacgcttag cggtggcttc ttcgttgctg taattgaacg
841 ggtcgagatg ccgacgtgag tgagtggggg catgcttggg aggcgcagga tggtactggc
901 acatctaaca tctacatttc tctagctcag cctcacaggc caaagcatca gcaccagaac
961 gcacacccag cccagcccca aagagaaaga agagagcaaa aagctgcagc cggtgcttgc
1021 acaccgcctt gcacatagca gaggctccgg gctcactcct tcctggtggg aaaggaagat
1081 gcctgtcctc tccgtggagg accctgggcc ctcaccgcag gcagcagttt gcgttttgaa
1141 aggttattgg gtcccttcct cgggctgtgt tcttgctggt gagcaaagtg ttgcctgcag
1201 aaataaaatg cagaacgtac tctaaaaaaa aaaaaaaaa
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