LOCUS BC066231 790 bp mRNA linear HUM 30-JUN-2006 DEFINITION Homo sapiens CRLF1 associated cytokine-like factor 1, mRNA (cDNA clone MGC:79249 IMAGE:7002181), complete cds. ACCESSION BC066231 VERSION BC066231.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 790) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 790) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-FEB-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Narayan Bhat cDNA Library Preparation: Bhat Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 172 Row: h Column: 12 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 50726992. FEATURES Location/Qualifiers source 1..790 /db_xref="H-InvDB:HIT000262126" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:79249 IMAGE:7002181" /tissue_type="PCR rescued clones" /clone_lib="NIH_MGC_195" /lab_host="DH10B" /note="Vector: pDNR-Dual" gene 1..790 /gene="CLCF1" /gene_synonym="BSF3" /gene_synonym="CISS2" /gene_synonym="CLC" /gene_synonym="NNT1" /gene_synonym="NR6" /db_xref="GeneID:23529" /db_xref="HGNC:HGNC:17412" /db_xref="MIM:607672" CDS 5..682 /gene="CLCF1" /gene_synonym="BSF3" /gene_synonym="CISS2" /gene_synonym="CLC" /gene_synonym="NNT1" /gene_synonym="NR6" /codon_start=1 /product="cardiotrophin-like cytokine factor 1" /protein_id="AAH66231.1" /db_xref="GeneID:23529" /db_xref="HGNC:HGNC:17412" /db_xref="MIM:607672" /translation="MDLRAGDSWGMLACLCTVLWHLLAVPALNRTGDPGPGPSIQKTY DLTRYLEHQLRSLAGTYLNYLGPPFNEPDFNPPRLGAETLPRATVDLEVWRSLNDKLR LTQNYEAYSHLLCYLRGLNRQAATAELRRSLAHFCTSLQGLLGSIAGVMAALGYPLPQ PLPGTEPTWTPGPAHSDFLQKMDDFWLLKELQTWLWRSAKDFNRLKKKMQPPAAAVTP HLGAHGF" BASE COUNT 145 a 281 c 212 g 152 t ORIGIN 1 ccccatggac ctccgagcag gggactcgtg ggggatgtta gcgtgcctgt gcacggtgct 61 ctggcacctc cttgcagtgc cagctctcaa tcgcacaggg gacccagggc ctggcccctc 121 catccagaaa acctatgacc tcacccgcta cctggagcac caactccgca gcttggctgg 181 gacctatctg aactacctgg gccccccttt caacgagcca gacttcaacc ctccccgcct 241 gggggcagag actctgccca gggccactgt tgacttggag gtgtggcgaa gcctcaatga 301 caaactgcgg ctgacccaga actacgaggc ctacagccac cttctgtgtt acttgcgtgg 361 cctcaaccgt caggctgcca ctgctgagct gcgccgcagc ctggcccact tctgcaccag 421 cctccagggc ctgctgggca gcattgcggg cgtcatggca gctctgggct acccactgcc 481 ccagccgctg cctgggactg aacccacttg gactcctggc cctgcccaca gtgacttcct 541 ccagaagatg gacgacttct ggctgctgaa ggagctgcag acctggctgt ggcgctcggc 601 caaggacttc aaccggctca agaagaagat gcagcctcca gcagctgcag tcaccccgca 661 cctgggggct catggcttct gacttctgac cttctcctct tcgctccccc ttcaaaccct 721 gctcccactt tgtgagagcc agccctgtat gccaacacct gttgagccag gagacagaag 781 ctgtgagcct //