LOCUS BC065818 1193 bp mRNA linear HUM 27-JAN-2004
DEFINITION Homo sapiens LIM domain only 4, mRNA (cDNA clone MGC:75040
IMAGE:6196307), complete cds.
ACCESSION BC065818
VERSION BC065818.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1193)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1193)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (26-JAN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. James R. Lupski
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield,
Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin,
Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo
Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven
Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline
Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott,
Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy,
George Yang, Scott Zuyderduyn, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 141 Row: g Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7108354.
FEATURES Location/Qualifiers
source 1..1193
/db_xref="H-InvDB:HIT000262058"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:75040 IMAGE:6196307"
/tissue_type="Peripheral Nervous System, sympathetic
trunk"
/clone_lib="Lupski_sympathetic_trunk"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1193
/gene="LMO4"
/db_xref="GeneID:8543"
/db_xref="MIM:603129"
CDS 75..572
/gene="LMO4"
/codon_start=1
/product="LMO4 protein"
/protein_id="AAH65818.1"
/db_xref="GeneID:8543"
/db_xref="MIM:603129"
/translation="MVNPGSSSQPPPVTAGSLSWKRCAGCGGKIADRFLLYAMDSYWH
SRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYIRLFGNSGACSACGQSIPASELVMR
AQGNVYHLKCFTCSTCRNRLVPGDRFHYINGSLFCEHDRPTALINGHLNSLQSNPLLP
DQKVC"
misc_feature 141..320
/gene="LMO4"
/note="LIM; Region: LIM domain. This family represents two
copies of the LIM structural domain"
/db_xref="CDD:pfam00412"
misc_feature 333..494
/gene="LMO4"
/note="LIM; Region: LIM domain. This family represents two
copies of the LIM structural domain"
/db_xref="CDD:pfam00412"
BASE COUNT 334 a 261 c 293 g 305 t
ORIGIN
1 gaaattgtca gcggcggcaa gcgcaggaaa gttgagagga gctcgtggcc ccagaacaaa
61 gcttgagaaa aaccatggtg aatccgggca gcagctcgca gccgcccccg gtgacggccg
121 gctccctctc ctggaagcgg tgcgcaggct gcgggggcaa gattgcggac cgctttctgc
181 tctatgccat ggacagctat tggcacagcc ggtgcctcaa gtgctcctgc tgccaggcgc
241 agctgggcga catcggcacg tcctgttaca ccaaaagtgg catgatcctt tgcagaaatg
301 actacattag gttatttgga aatagcggtg cttgcagcgc ttgcggacag tcgattcctg
361 cgagtgaact cgtcatgagg gcgcaaggca atgtgtatca tcttaagtgt tttacatgct
421 ctacctgccg gaatcgcctg gtcccgggag atcggtttca ctacatcaat ggcagtttat
481 tttgtgaaca tgatagacct acagctctca tcaatggcca tttgaattca cttcagagca
541 atccactact gccagaccag aaggtctgct aaaaggtcag agtaatgcag aatgcgtgcc
601 ttcatctcag atttgttcat cacaggtgga tcccatgtgt cttcagtaga caagtcacct
661 ttgtagctag caccagtgcc agctccatgc cattgcacct tctttagtct tgattgccct
721 tcccgcattt attggtgtat taaaatgact gaatatgaac attaaggact ccatgaacct
781 gggctaatgg gagactgtag agaaaatgaa aaaagatcca ccagaggaca tcttggggag
841 ggggagggag ctggggggga gggaaatgac taatgaagct aattaaaaga agcattcaaa
901 tctgctttct accctcatta acaattagca gggcactggc cagagtttgt accctgtgtt
961 ttaccttaac aacattctat ttgctctttg tatatttaag tgttgtaagg aaacgtgttt
1021 caatcaaaac tgaccatgag ataaaggaaa gagatgtggc ttttgtgata ttctatcaca
1081 aacacttatt gtatctctgt aaaatacaat gtatgtatgc atgtaagtgt ttttgtccta
1141 atgttgctac tcccatggca aagaaaaaaa aaagaatgaa aaaaaaaaaa aaa
//