LOCUS BC065759 982 bp mRNA linear HUM 03-NOV-2008
DEFINITION Homo sapiens interferon regulatory factor 2 binding protein 2, mRNA
(cDNA clone IMAGE:4618488), complete cds.
ACCESSION BC065759
VERSION BC065759.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 982)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 982)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-JAN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 51 Row: h Column: 13
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..982
/db_xref="H-InvDB:HIT000262040"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4618488"
/tissue_type="Lung"
/clone_lib="NIH_MGC_77"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..982
/gene="IRF2BP2"
/db_xref="GeneID:359948"
/db_xref="HGNC:HGNC:21729"
CDS 77..568
/gene="IRF2BP2"
/codon_start=1
/product="IRF2BP2 protein"
/protein_id="AAH65759.1"
/db_xref="GeneID:359948"
/db_xref="HGNC:HGNC:21729"
/translation="MAALILVADNAGGSHASKDANQVHSTTRRNSNSPPSPSSMNQRR
LGPREVGGQGAGNTGGLEPVHPASLPDSSLATSAPLCCTLCHERLEDTHFVQCPSVPS
HKFCFPCSRQSIKQQGASGEVYCPSGEKCPLVGSNVPWAFMQGEIATILAGDVKVKKE
RDS"
BASE COUNT 269 a 231 c 226 g 256 t
ORIGIN
1 ggggggtggc ggtggcggcc gcgtcccggc ggcagtcgtg ctacctgtgt gacctgcccc
61 gcatgcccag tcccccatgg cagccctgat cttagtagca gacaatgcag ggggcagtca
121 tgcctcaaaa gatgccaacc aggttcactc cactaccagg aggaatagca acagtccgcc
181 ctctccgtcc tctatgaacc aaagaaggct gggccccaga gaggtggggg gccagggagc
241 aggcaacaca ggaggactgg agccagtgca ccctgccagc ctcccggact cctctctggc
301 aaccagtgcc ccgctgtgct gcaccctctg ccacgagcgg ctggaggaca cccattttgt
361 gcagtgcccg tccgtccctt cgcacaagtt ctgcttccct tgctccagac aaagcatcaa
421 acagcaggga gctagtggag aggtctattg tcccagtggg gaaaaatgcc ctcttgtggg
481 ctccaatgtc ccctgggcct ttatgcaagg ggaaattgca accatccttg ctggagatgt
541 gaaagtgaaa aaagagagag actcgtgact tttccggttt cagaaaaacc caatgattac
601 ccttaattaa aactgcttga attgtatata tatctccata tatatatata tccaagacaa
661 gggaaatgta gacttcataa acatggctgt ataattttga ttttttttga atacattgtg
721 tttctatatt ttttttgacg acaaaaggta tgtacttata aagacatttt tttcttttgt
781 taacgttatt agcatatctt tgtgctttat tatcctggtg acagttaccg ttctatgtag
841 gctgtgactt gcgctgcttt tttagagcac ttggcaaatc agaaatgctt ctagctgtat
901 ttgtatgcac ttattttaaa aagaaaaaaa aagccaaata cattttctga cattgaaaaa
961 aaaaaaaaaa aaaaaaaaaa aa
//