LOCUS BC065731 1382 bp mRNA linear HUM 04-AUG-2008
DEFINITION Homo sapiens neutrophil cytosolic factor 1, mRNA (cDNA clone
MGC:72067 IMAGE:6735930), complete cds.
ACCESSION BC065731
VERSION BC065731.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1382)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1382)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-JAN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: NCI
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 51 Row: p Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4557784.
FEATURES Location/Qualifiers
source 1..1382
/db_xref="H-InvDB:HIT000262012"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:72067 IMAGE:6735930"
/tissue_type="Pooled, 40 cell lines"
/clone_lib="NIH_MGC_127"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1382
/gene="NCF1"
/gene_synonym="NCF1A"
/gene_synonym="NOXO2"
/gene_synonym="p47phox"
/gene_synonym="SH3PXD1A"
/db_xref="GeneID:653361"
/db_xref="HGNC:HGNC:7660"
/db_xref="MIM:608512"
CDS 27..1199
/gene="NCF1"
/gene_synonym="NCF1A"
/gene_synonym="NOXO2"
/gene_synonym="p47phox"
/gene_synonym="SH3PXD1A"
/codon_start=1
/product="neutrophil cytosolic factor 1"
/protein_id="AAH65731.1"
/db_xref="GeneID:653361"
/db_xref="HGNC:HGNC:7660"
/db_xref="MIM:608512"
/translation="MGDTFIRHIALLGFEKRFVPSQHYVYMFLVKWQDLSEKVVYRRF
TEIYEFHKTLKEMFPIEAGAINPENRIIPHLPAPKWFDGQRAAENRQGTLTEYCGTLM
SLPTKISRCPHLLDFFKVRPDDLKLPTDNQTKKPETYLMPKDGKSTATDITGPIILQT
YRAIANYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKAKRGWIPASFLEPLDSPDE
TEDPEPNYAGEPYVAIKAYTAVEGDEVSLLEGEAVEVIHKLLDGWWVIRKDDVTGYFP
SMYLQKSGQDVSQAQRQIKRGAPPRRSSIRNAHSIHQRSRKRLSQDAYRRNSVRFLQQ
RRRQARPGPQSPGSPLEEERQTQRSKPQPAVPPRPSADLILNRCSESTKRKLASAV"
BASE COUNT 320 a 446 c 401 g 215 t
ORIGIN
1 gggggagcac tggaggccac ccagtcatgg gggacacctt catccgtcac atcgccctgc
61 tgggctttga gaagcgcttc gtacccagcc agcactatgt gtacatgttc ctggtgaaat
121 ggcaggacct gtcggagaag gtggtctacc ggcgcttcac cgagatctac gagttccata
181 aaaccttaaa agaaatgttc cctattgagg caggggcgat caatccagag aacaggatca
241 tcccccacct cccagctccc aagtggtttg acgggcagcg ggccgccgag aaccgccagg
301 gcacacttac cgagtactgc ggcacgctca tgagcctgcc caccaagatc tcccgctgtc
361 cccacctcct cgacttcttc aaggtgcgcc ctgatgacct caagctcccc acggacaacc
421 agacaaaaaa gccagagaca tacttgatgc ccaaagatgg caagagtacc gcgacagaca
481 tcaccggccc catcatcctg cagacgtacc gcgccattgc caactacgag aagacctcgg
541 gctccgagat ggctctgtcc acgggggacg tggtggaggt cgtagagaag agcgagagcg
601 gttggtggtt ctgtcagatg aaagcaaagc gaggctggat cccagcgtcc ttcctcgagc
661 ccctggacag tcctgacgag acggaagacc ctgagcccaa ctatgcaggt gagccatacg
721 tcgccatcaa ggcctacact gctgtggagg gggacgaggt gtccctgctc gagggtgaag
781 ctgttgaggt cattcacaag ctcctggacg gctggtgggt catcaggaaa gacgacgtca
841 caggctactt cccgtccatg tacctgcaaa agtcagggca agacgtgtcc caggcccaac
901 gccagatcaa gcggggggcg ccgccccgca ggtcgtccat ccgcaacgcg cacagcatcc
961 accagcggtc gcggaagcgc ctcagccagg acgcctatcg ccgcaacagc gtccgttttc
1021 tgcagcagcg acgccgccag gcgcggccgg gaccgcagag ccccgggagc ccgctcgagg
1081 aggagcggca gacgcagcgc tctaaaccgc agccggcggt gcccccgcgg ccgagcgccg
1141 acctcatcct gaaccgctgc agcgagagca ccaagcggaa gctggcgtct gccgtctgag
1201 gctggagcgc agtccccagc tagcgtctcg gcccttgccg ccccgtgcct gtacatacgt
1261 gttctataga gcctggcgtc tggacgccga gggcagcccc gacccctgtc cagcgcggct
1321 cccgccaccc tcaataaatg ttgcttggag cgaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1381 aa
//