LOCUS BC065521 1420 bp mRNA linear HUM 03-FEB-2004
DEFINITION Homo sapiens ninein (GSK3B interacting protein), mRNA (cDNA clone
IMAGE:5787361), partial cds.
ACCESSION BC065521
VERSION BC065521.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1420)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1420)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (26-JAN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Lou Staudt
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 140 Row: a Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 14149743.
FEATURES Location/Qualifiers
source 1..1420
/db_xref="H-InvDB:HIT000261928"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5787361"
/tissue_type="Lymph, lymphoma"
/clone_lib="NIH_MGC_85"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..>1420
/gene="NIN"
/gene_synonym="KIAA1565"
/db_xref="GeneID:51199"
CDS <1..>1420
/gene="NIN"
/gene_synonym="KIAA1565"
/codon_start=3
/product="NIN protein"
/protein_id="AAH65521.1"
/db_xref="GeneID:51199"
/translation="SALGAAVPLPPPSPECASGHGSRGGAGRLSPGTQALEAGCRLCG
RSGETDRSFDTTGTGSLGQEELTDLCHMLSLEEVAPVLQQTLLQDNLLGRVHFDQFKE
ALILILSRTLSNEEHFQEPDCSLEAQPKYVRGGKRYGRRSLPEFQESVEEFPEVTVIE
PLDEEARPSHIPAGDCSEHWKTQRSEEYEAEGQLRFWNPDDLNASQSGSSPPQDWIEE
KLQEVCEDLGITRDGHLNRKKLVSICEQYGLQNVDGEMLEEVFHNLDPDGTMSVEDFF
YGLFKNGKSLTPSASTPYRQLKRHLSMQSFDESGRRTTTSSAMTSTIGFRVFSCLDDG
MGHASVERILDTWQEEGIENSQEILKALDFSLDGNINLTELTLALENELLVTKNSIHQ
AALASFKAEIRHLLERVDQVVREKEKLRSDLDKAEKLKSLMASEVDDHHAAIERRNEY
NLRKLDEEYKERIAALKKKKKK"
BASE COUNT 394 a 330 c 404 g 292 t
ORIGIN
1 cgagcgcgct gggcgcggcc gtcccgctgc cgccgccaag cccggagtgc gccagcggcc
61 atggttcccg cggcggcgcc gggcgcctga gccccgggac gcaagcgctg gaggcgggct
121 gccggctgtg cgggcgctcc ggagagaccg acagaagttt tgacacgacg ggcacagggt
181 ccctggggca ggaggaactc accgaccttt gccacatgtt gagcttggag gaggtggccc
241 cagtgctgca gcagacatta cttcaggaca acctcttggg cagggtacat tttgaccaat
301 ttaaagaagc attaatactc atcttgtcca gaactctgtc aaatgaagaa cactttcaag
361 aaccagactg ctcactagaa gctcagccca aatatgttag aggtgggaag cgttacggac
421 gaaggtcctt gcccgagttc caagagtccg tggaggagtt tcctgaagtg acggtgattg
481 agccactgga tgaagaagcg cggccttcac acatcccagc cggtgactgc agtgagcact
541 ggaagacgca acgcagtgag gagtatgaag cggaaggcca gttaaggttt tggaacccag
601 atgacttgaa tgcttcacag agtggatctt cccctcccca agactggata gaagagaaac
661 tgcaagaagt ttgtgaagat ttggggatca cccgtgatgg tcacctgaac cggaagaagc
721 tggtctccat ctgtgagcag tatggtttac agaatgtgga tggagagatg ctcgaggaag
781 tattccataa tcttgatcct gacggtacaa tgagtgtaga agattttttc tatggtttgt
841 ttaaaaatgg aaaatctctt acaccatcag catctactcc atatagacaa ctaaaaaggc
901 acctttccat gcagtctttc gatgagagtg gacgacgtac cacaacctca tcagcaatga
961 caagtaccat tggctttcgg gtcttctcct gcctggatga tgggatgggc catgcatctg
1021 tggagagaat actcgacacc tggcaggaag agggcattga gaacagccag gagatcctga
1081 aggccttgga tttcagcctc gatggaaaca tcaatttgac agaattaaca ctggcccttg
1141 aaaatgaact tttggttacc aagaacagca ttcaccaggc ggctctggcc agctttaagg
1201 ctgaaatccg gcatttgttg gaacgagtcg atcaggtggt cagagaaaaa gagaagctac
1261 ggtcagatct ggacaaggcc gagaagctca agtctttaat ggcctcggag gtggatgatc
1321 accatgcggc catagagcgg cggaatgagt acaacctcag gaaactggat gaagagtaca
1381 aggagcgaat agcagcctta aaaaaaaaaa aaaaaaaaaa
//