LOCUS BC065302 3066 bp mRNA linear HUM 02-DEC-2004 DEFINITION Homo sapiens lin-9 homolog (C. elegans), mRNA (cDNA clone IMAGE:6156654), partial cds. ACCESSION BC065302 VERSION BC065302.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3066) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3066) AUTHORS Director MGC Project. TITLE Direct Submission JOURNAL Submitted (12-JAN-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 140 Row: l Column: 6 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 32996736. FEATURES Location/Qualifiers source 1..3066 /db_xref="H-InvDB:HIT000261864" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:6156654" /tissue_type="Uterus, leiomyosarcoma" /clone_lib="NIH_MGC_71" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene <1..3066 /gene="LIN9" /gene_synonym="BARA" /gene_synonym="BARPsv" /gene_synonym="Lin-9" /gene_synonym="TGS" /gene_synonym="TGS1" /db_xref="GeneID:286826" CDS <1..1707 /gene="LIN9" /gene_synonym="BARA" /gene_synonym="BARPsv" /gene_synonym="Lin-9" /gene_synonym="TGS" /gene_synonym="TGS1" /codon_start=1 /product="LIN9 protein" /protein_id="AAH65302.1" /db_xref="GeneID:286826" /translation="GWDRVPDVATRRGLLRPAVSGKVRGRRRPSNVGFGNCSSAKALV SLKEGSLSNTWNEKYSSLQKTPVWKGRNTSSAVEMPFRNSKRSRLFSDEDDRQINTRS PKRNQRVAMVPQKFTATMSTPDKKASQKIGFRLRNLLKLPKAHKWCIYEWFYSNIDKP LFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIRRLMGKPRRCSSAFFEEERSALKQKR QKIRLLQQRKVADVSQFKDLPDEIPLPLVIGTKVTARLRGVHDGLFTGQIDAVDTLNA TYRVTFDRTGLGTHTIPDYEVLSNEPHETMPIAAFGQKQRPSRFFMTPPRLHYTPPLQ SPIIDNDPLLGQSPWRSKISGSDTETLGGFPVEFLIQVTRLSKILMIKKEHIKKLREM NTEAEKLKSYSMPISIEFQRRYATIVLELEQLNKDLNKVLHKVQQYCYELAPDQGLQP ADQPTDMRRRCEEEAQEIVRHANSSTGQPCVENENLTDLISRLTAILLQIKCLAEGGD LNSFEFKSLTDSLNDIKSTIDASNISCFQNNVEIHVAHIQSGLSQMGNLHAFAANNTN RD" BASE COUNT 1052 a 506 c 583 g 925 t ORIGIN 1 ggctgggacc gagtcccgga cgtcgcgacg cgcagggggc tgctgcggcc ggcggtctcg 61 ggaaaagtga ggggacggag gcgcccaagc aacgtgggtt tcgggaactg ctcttcagca 121 aaagcccttg tcagtttaaa agaaggaagc ttatctaaca cgtggaatga aaagtacagt 181 tctttacaga aaacacctgt ttggaaaggc aggaatacaa gctctgctgt ggaaatgcct 241 ttcagaaatt caaaacgaag tcgacttttt tctgatgaag atgataggca aataaataca 301 aggtcaccta aaagaaacca gagggttgca atggttccac agaaatttac agcaacaatg 361 tcaacaccag ataagaaagc ttcacagaag attggttttc gattacgtaa tctgctcaag 421 cttcctaaag cacataaatg gtgtatatac gagtggttct attcaaatat agataaacca 481 ctttttgaag gtgataatga cttttgtgta tgtctaaagg aatcttttcc taatttgaaa 541 acaagaaagt taacaagagt agaatgggga aaaattcggc ggcttatggg aaaaccacgg 601 agatgttctt ctgcattttt tgaggaagag agatcagcat taaaacagaa acggcagaaa 661 ataaggctct tacaacaaag gaaagttgca gatgtttcac aattcaaaga tctcccagat 721 gaaattcctt tgcctctggt tattggaacg aaagttacag cacgattacg tggtgttcat 781 gatggtttgt tcactggaca aatagatgct gtggatactc ttaatgctac ttatagagta 841 acttttgata ggacagggct tggaacccat accatccctg actatgaagt tctcagtaat 901 gaacctcatg agacaatgcc aattgctgcc tttggacaaa aacagcggcc ttctcgattt 961 tttatgaccc caccacggtt acattatact cctcctctcc agtcaccaat tatagataat 1021 gatcctttat taggacagtc gccgtggaga agtaaaattt ctggctctga cactgaaaca 1081 ttaggtggtt ttccagtaga atttcttatc caagtgacca gattatcaaa aattctcatg 1141 attaaaaagg aacatatcaa gaaattaagg gaaatgaaca cagaagcaga aaaattgaaa 1201 tcatattcca tgcccatcag cattgaattt cagcggagat atgcaacaat tgttctggag 1261 cttgaacagc tgaacaagga cctaaacaaa gttttgcata aagttcaaca gtattgctat 1321 gagcttgctc cagaccaggg gctccagcct gcagatcagc caacagatat gagacgcagg 1381 tgtgaggaag aagcacagga aattgttcgg catgcaaatt cctcaacagg acagccctgc 1441 gttgaaaatg aaaatctgac agacttaatt tccaggctta cagctatttt gttacaaatt 1501 aagtgtctag cagaaggagg agacctgaat tcctttgaat tcaaatcact tacagactca 1561 ttaaatgata tcaagagtac aatagacgct tctaatatca gttgctttca gaataatgta 1621 gaaatccatg ttgcacatat tcagagtggc ctgagccaga tgggaaactt acatgccttt 1681 gcagcaaata acaccaacag agactgagta aagatttcat tattccaact gcacgggaca 1741 ttgtttttga gaagttcttt tcctttatat aggcttccaa caccaaataa cctaactgct 1801 ggaaaacaag ggaaatttaa atctccaaat aaggcatttt aatagactgt actgcttctt 1861 aaaccagcat tgctgaccag cattatattt atttttcttt tattattcag atgcagtagc 1921 attgcttatg ttacatatgt ttatattcac aaatattttt aaactgaaat atctgaacat 1981 aatataattt cgtggaagaa tacattgacc atttttttta atgtgcatga attcaccgca 2041 acacatgcag acaactgctg caatggagag tatgaagaaa cctggtcttt ttattcatgt 2101 cggtggcagt gtggaaattc catccagaaa attacaactc cacttgattt agttgatcac 2161 catctcagtc ttcaaaagat aacatcatga ggtgtgggaa gtcctagttt taaggaaacc 2221 actgaaatat agatgggaaa tgtggacttt acaagtatat gttatatata cttgcaatgt 2281 gacatggttc tgtagatcat tttataataa taaatatttt aatttatcat aacatataaa 2341 agaaaccttt gttgtttgtt gaaagaaaat gaaggaacag ggggaaaaaa ggtgcaaaat 2401 gctaaatttc taaaaatgga tttggcatgt cttcccatca gttcaggtca aaagtgcatt 2461 gttgtgagat ttattaaaaa aaaaatgata acacactatt ttcatatttt tttgtttatt 2521 tgcacaactt ttaaaccaga ttactggtta aaatccaaca gtacacaatt tataaagtaa 2581 aaagatttta taaggaaaac aaatataata accagtgctg tgaaatgcag aagaaaggct 2641 tgttttggtt gtttttcttt tttaggaaaa ccctgcctaa aatgttaatc ttgtaaaaag 2701 tatgtatttg gaattttctt cgttttaata gaatattata aagtcaaaat ataaattttt 2761 ttcaaatttg gagtttaaga tatagctgta gaggtggttt taattccttt agatgtctca 2821 taaaatgaga ctttttatat gttaatgtat aataaaactg aaacaagatt attttccatt 2881 tgaaattttt gtatagttta aaaaggcttc cgtattcttt gttggtattg tgccactgca 2941 gaactttagt gcagagttta tatttagcta aactgttatg ttaattaaga aatgcataaa 3001 tcttctattc ttaatatttg taattctaaa taaattgatc tatgaaaatt aaaaaaaaaa 3061 aaaaaa //