LOCUS BC065287 2660 bp mRNA linear HUM 11-AUG-2006 DEFINITION Homo sapiens suppressor of variegation 4-20 homolog 1 (Drosophila), mRNA (cDNA clone IMAGE:6015766), complete cds. ACCESSION BC065287 VERSION BC065287.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2660) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2660) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (12-JAN-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 140 Row: b Column: 8 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 50659083 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..2660 /db_xref="H-InvDB:HIT000261849" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:6015766" /tissue_type="Testis, embryonal carcinoma" /clone_lib="NIH_MGC_92" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2660 /gene="SUV420H1" /gene_synonym="CGI-85" /gene_synonym="MGC21161" /gene_synonym="MGC703" /db_xref="GeneID:51111" /db_xref="HGNC:HGNC:24283" CDS 209..1390 /gene="SUV420H1" /gene_synonym="CGI-85" /gene_synonym="MGC21161" /gene_synonym="MGC703" /codon_start=1 /product="suppressor of variegation 4-20 homolog 1 (Drosophila)" /protein_id="AAH65287.1" /db_xref="GeneID:51111" /db_xref="HGNC:HGNC:24283" /translation="MKWLGESKNMVVNGRRNGGKLSNDHQQNQSKLQHTGKDTLKAGK NAVERRSNRCNGNSGFEGQSRYVPSSGMSAKELCENDDLATSLVLDPYLGFQTHKMNT SAFPSRSSRHFSKSDSFSHNNPVRFRPIKGRQEELKEVIERFKKDEHLEKAFKCLTSG EWARHYFLNKNKMQEKLFKEHVFIYLRMFATDSGFEILPCNRYSSEQNGAKIVATKEW KRNDKIELLVGCIAELSEIEENMLLRHGENDFSVMYSTRKNCAQLWLGPAAFINHDCR PNCKFVSTGRDTACVKALRDIEPGEEISCYYGDGFFGENNEFCECYTCERRGTGAFKS RVGLPAPAPVINSKYGLRETDKRLNRLKKLGDSSKNSDSQSVSSNTDADTTQEKNNAS K" BASE COUNT 825 a 493 c 636 g 706 t ORIGIN 1 ctggaattat ttttggtgat taattttctg ggggggactg ggacgcgggg cccggcggcg 61 cggccccgca tcgcagcggc cgggcagcgg ggcctgggac gcgccccgag gaggagcggg 121 gcggcgcagg cggagagaac attgaaagta ttctctaagc tatttgaaga gagtgactaa 181 atgcacctgg gtcaggctgt ctgtgggtat gaagtggttg ggagaatcca agaacatggt 241 ggtgaatggc aggagaaatg gaggcaagtt gtctaatgac catcagcaga atcaatcaaa 301 attacagcac acggggaagg acaccctgaa ggctggcaaa aatgcagtcg agaggaggtc 361 gaacagatgt aatggtaact cgggatttga aggacagagt cgctatgtac catcctctgg 421 aatgtccgcc aaggaactct gtgaaaatga tgacctagca accagtttgg ttcttgatcc 481 ctatttaggt tttcaaacac acaaaatgaa tactagcgcc tttccttcga ggagctcaag 541 gcatttttca aaatctgaca gtttttctca caacaaccct gtgagattta ggcctattaa 601 aggaaggcag gaagaactaa aggaagtaat tgaacgtttt aagaaagatg aacacttgga 661 gaaagccttc aaatgtttga cttcaggcga atgggcacgg cactattttc tcaacaagaa 721 taaaatgcag gagaaattat tcaaagaaca tgtatttatt tatttgcgaa tgtttgcaac 781 tgacagtgga tttgaaatat tgccatgtaa tagatactca tcagaacaaa atggagccaa 841 aatagttgca acaaaagagt ggaaacgaaa tgacaaaata gaattactgg tgggttgtat 901 tgccgaactt tcagaaattg aggagaacat gctacttaga catggagaaa acgacttcag 961 tgtcatgtac tccacaagga aaaactgtgc tcaactctgg ctgggtcctg ctgcgtttat 1021 aaaccatgat tgcagaccta attgtaagtt tgtgtcaact ggtcgagata cagcatgtgt 1081 gaaggctcta agagacattg aacctggaga agaaatttct tgttattatg gagatgggtt 1141 ctttggagaa aataatgagt tctgcgagtg ttacacttgc gaaagacggg gcactggtgc 1201 ttttaaatcc agagtgggac tgcctgcgcc tgctcctgtt atcaatagca aatatggact 1261 cagagaaaca gataaacgtt taaataggct taaaaagtta ggtgacagca gcaaaaattc 1321 agacagtcaa tctgtcagct ctaacactga tgcagatacc actcaggaaa aaaacaatgc 1381 aagtaagtaa gggagatttg ataagcatat cttttaaaag tattttcaca caatttgctt 1441 tataaagtgt gcttcagtag ttttaaactt ttaaatactc agagagactg ggacttgtga 1501 gctttggctg cacttcaagg ctctagacgt gatttgagta gaggcacagt ctgtatccca 1561 tctctaactt cagtaccgtc ctctagacta tttttcttga ataccttggt aactggatat 1621 gagttcttca tcatatcttc caaggtcatc atatgtttta aacattttca aggtgttaga 1681 gactgtgatg atgtcgctaa gtcctgcaag aagacaaaag gactgagtag aattaaatta 1741 gactctatac attccagtgc ctagccagtt tgttagaaaa gatgatggac ttggggaatt 1801 catagcttct ggccttaagg cttccacctt ttcattgctt gctgaccttt ttcaaaacga 1861 actgactcag ttcagcagac caccagtacc agactcagaa ttgtgataga ggagcatttt 1921 gaacagtgcc gtattgtgac atgctgtatt ggctactcca gaaagtagga gtaaagatgg 1981 aaaggagaaa gaagcaacct ctgagattcc agtggtgtgt gggggcaaga tctgatggaa 2041 actgaaaaag agaacgaaga ctaaacaaag agaaaggaaa gagaagaaac cctaaatggg 2101 caaaggaaag cacatcctgt ttgcggagct ttgaaatatt ggaaccattt ctaattgctc 2161 ctgtttttct gggtaacacc agttttctgt agttgccact aaagcagtag actcttgagt 2221 ctcacttgtc tctgagagag acagaagtta gaaagttttg acttggcgat tccgaaagta 2281 tgcctttgtt ggcacttaaa tgtccagtga gacttcttgg caccttagag ccctctgaga 2341 tactgattat tttaggttct tctccctact ttcagatgtt ttcagcccaa cactgggtgc 2401 tctcttccac tacagagaat cctgaagaaa agggaaggtg tttcccatga tggtgaatgt 2461 cactgccatg aattcctgaa tctacctgct gctgggagtc agagtccaag cataacccgt 2521 gtagcataaa agcagcgctg tagccctatt ccagtctttt tcgttaatgt ccagagtgaa 2581 caacaagagt tagtcaatca ttaactgttg actgttgatt ctcataataa atgcagcata 2641 acgacaaaaa aaaaaaaaaa //