LOCUS BC065271 2179 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens armadillo repeat containing 9, mRNA (cDNA clone
MGC:74894 IMAGE:6165433), complete cds.
ACCESSION BC065271
VERSION BC065271.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2179)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2179)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-JAN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 140 Row: n Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 29336082.
FEATURES Location/Qualifiers
source 1..2179
/db_xref="H-InvDB:HIT000261834"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:74894 IMAGE:6165433"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2179
/gene="ARMC9"
/gene_synonym="ARM"
/gene_synonym="FLJ12584"
/db_xref="GeneID:80210"
/db_xref="HGNC:HGNC:20730"
CDS 27..2024
/gene="ARMC9"
/gene_synonym="ARM"
/gene_synonym="FLJ12584"
/codon_start=1
/product="armadillo repeat containing 9"
/protein_id="AAH65271.1"
/db_xref="GeneID:80210"
/db_xref="HGNC:HGNC:20730"
/translation="MGDILAHESELLGLVKEYLDFAEFEDTLKTFSKECKIKGKPLCK
TVGGSFRDSKSLTIQKDLVAAFDNGDQKVFFDLWEEHISSSIRDGDSFAQKLEFYLHI
HFAIYFLKYSVGRPDKEELDEKISYFKTYLETKGAALSQTTEFLPFYALPFVPNPMVH
PSFKELFQDSWTPELKLKLEKFLALISKASNTPKLLTIYKENGQSNKEILQQLHQQLV
EAERRSVTYLKRYNKIQADYHNLIGVTAELVDSLEATVSGKMITPEYLQSVCVRLFSN
QMRQSLAHSVDFTRPGTASTMLRASLAPVKLKDVPLLPSLDYEKLKKDLILGSDRLKA
FLLQALRWRLTTSHPGEQRETVLQAYISNDLLDCYSHNQRSVLQLLHSTSDVVRQYMA
RLINAFASLAEGRLYLAQNTKVLQMLEGRLKEEDKDIITRENVLGALQKFSLRRPLQT
AMIQDGLIFWLVDVLKDPDCLSDYTLEYSVALLMNLCLRSTGKNMCAKVAGLVLKVLS
DLLGHENHEIQPYVNGALYSILSVPSIREEARAMGMEDILRCFIKEGNAEMIRQIEFI
IKQLNSEELPDGVLESDDDEDEDDEEDHDIMEADLDKDELIQPQLGELSGEKLLTTEY
LGIMTNTGKTRRKGLANVQWSGDEPLQRPVTPGGHRNGYPV"
BASE COUNT 644 a 495 c 540 g 500 t
ORIGIN
1 gaattaatta ccagtaacag ttcaatatgg gggacattct ggctcatgaa tctgaattac
61 ttggactagt gaaagagtat ttagattttg ctgaatttga agacaccttg aaaacatttt
121 caaaagaatg caaaataaaa ggaaaaccac tgtgtaaaac agtaggcgga tctttcagag
181 actccaaatc attgacaatt cagaaggatc ttgtcgctgc atttgacaac ggagaccaga
241 aggtgttctt cgatctgtgg gaggagcaca tttcaagttc catccgagat ggggactcct
301 ttgcccagaa gctggaattc tatctccaca tccattttgc catctatttt ttgaagtact
361 ctgtggggag accggacaaa gaggagctgg atgaaaagat ttcctacttc aaaacctacc
421 tggagaccaa aggggcagcc ttgagccaga ccacagagtt tcttcctttc tatgcccttc
481 cttttgttcc caaccctatg gtgcacccct catttaaaga actcttccag gattcctgga
541 ctccagagtt aaagttgaag ttggaaaagt ttctagcttt aatatctaaa gccagcaaca
601 cgccaaagct tttaacaata tataaggaga atggacaaag taacaaagaa atcttgcagc
661 agctccacca gcagctggtt gaagctgaac gtaggtcagt gacatacctc aaacggtaca
721 ataagatcca ggccgactac cacaatctca ttggagtcac agcagagctg gtggattctc
781 tagaggccac agtcagcggc aagatgatca cccctgagta cctccagagc gtctgtgtcc
841 gcctgttcag taaccagatg cggcagagcc tggcgcatag tgtggacttc acgaggcctg
901 ggacggcatc caccatgtta cgagcctcct tggcacccgt gaaattgaag gatgtcccat
961 tactgccctc cttggattat gagaaactga agaaggattt gattttgggg agtgaccgct
1021 tgaaagcctt cttgttgcag gctctgcgct ggcgcttgac cacatcccat cctggagagc
1081 agagggagac cgttctgcaa gcctacatca gcaatgacct cttggactgt tatagccaca
1141 accagaggag tgtgcttcag ttgctgcact ccacgagcga cgtggtgcgg cagtacatgg
1201 ccaggctcat caatgctttt gcgtcactgg cagaaggtcg cctctacctt gcccagaaca
1261 caaaggtgct gcagatgctg gagggaaggc tgaaggagga ggacaaggat atcatcacca
1321 gggagaatgt tcttggggcc ctgcagaagt tcagtctcag gcgcccgctg cagacagcga
1381 tgattcaaga cggcctcatc ttctggctgg ttgatgttct gaaggaccct gactgcctgt
1441 ctgactacac gctggagtac tcggtggctt tgctcatgaa cctctgcctc cgcagcacag
1501 ggaagaacat gtgtgccaag gtggcaggcc tcgtgctcaa agtcctttcg gatcttcttg
1561 gccatgaaaa ccatgagata cagccgtatg tgaatggagc tctgtacagc atcctttctg
1621 ttccatccat tcgtgaggaa gcaagagcaa tgggaatgga agacatccta cgctgcttca
1681 tcaaagaagg caatgctgaa atgatccgcc agatagaatt catcatcaag cagctaaatt
1741 ccgaagagct accagatggt gttcttgaat ctgatgatga tgaagatgaa gatgatgaag
1801 aggaccatga catcatggaa gccgatctgg acaaagacga actgatccag ccccagctcg
1861 gagaactctc aggagagaag cttctgacca cggagtacct ggggatcatg accaacacgg
1921 ggaagacaag gcggaagggg ctggctaatg tgcagtggag cggggatgag cccctgcaaa
1981 ggcccgtcac ccccggcggc cacagaaacg ggtacccagt gtaagtcagg gctaaaggaa
2041 gcgggaattg actttcttaa gctttgtttt gattacagtg taagatgtat gtatttttaa
2101 aattcaaaat aaagcattca ttttgaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2161 aaaaaaaaaa aaaaaaaaa
//