LOCUS BC065261 1948 bp mRNA linear HUM 03-FEB-2004
DEFINITION Homo sapiens tubby like protein 1, mRNA (cDNA clone MGC:70753
IMAGE:6144003), complete cds.
ACCESSION BC065261
VERSION BC065261.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1948)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1948)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (12-JAN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 140 Row: j Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 6715609.
FEATURES Location/Qualifiers
source 1..1948
/db_xref="H-InvDB:HIT000261824"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:70753 IMAGE:6144003"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1948
/gene="TULP1"
/gene_synonym="RP14"
/gene_synonym="TUBL1"
/db_xref="GeneID:7287"
/db_xref="MIM:602280"
CDS 13..1482
/gene="TULP1"
/gene_synonym="RP14"
/gene_synonym="TUBL1"
/codon_start=1
/product="TULP1 protein"
/protein_id="AAH65261.1"
/db_xref="GeneID:7287"
/db_xref="MIM:602280"
/translation="MPLRDETLREVWASDSGHEEESLSPEAPRRPKQRPAPAQRLRKK
RTEAPESPCPTGSKPRKPGEEEEEEEDEEDEEEEAEEKKEKILLPPKKPLREKSSADL
KERRAKAQGPRGDLGSPDPPPKPLRVRNKEAPAGEGTKMRKTKKKGSGEADKDPSGSP
ASARKSPAAMFLVGEGSPDKKALKKKGTPKGARKEEEEEEEAATVIKNSNQKGKAKGK
GKKKAKEERAPSPPVEVDEPREFVLRPAPQGRTVRCRLTRDKKGMDRGMYPSYFLHLD
TEKKVFLLAGRKRKRSKTANYLISIDPTNLSRGGENFIGKLRSNLLGNRFTVFDNGQN
PQRGYSTNVASLRQELAAVIYETNVLGFRGPRRMTVIIPGMSAENERVPIRPRNASDG
LLVRWQNKTLESLIELHNKPPVWNDDSGSYTLNFQGRVTQASVKNFQIVHADDPDYIV
LQFGRVAEDAFTLDYRYPLCALQAFAIALSSFDGKLACE"
misc_feature 745..1479
/gene="TULP1"
/gene_synonym="RP14"
/gene_synonym="TUBL1"
/note="Tub; Region: Tub family"
/db_xref="CDD:pfam01167"
BASE COUNT 478 a 581 c 622 g 267 t
ORIGIN
1 ggcaaaggca ccatgcctct gcgggatgaa accctccgag aggtgtgggc ctctgacagt
61 gggcatgaag aagaaagcct gagcccggag gccccgcggc gccccaaaca gcgacccgcc
121 ccggcacaga ggctaaggaa gaagaggacg gaggcccccg aatccccctg ccccacggga
181 tccaagcccc ggaagcccgg agaggaggag gaggaagagg aggacgagga ggacgaggaa
241 gaggaggcag aggaaaagaa agagaaaatc cttctgcctc ccaagaagcc cctgagagag
301 aagagctccg cagacctgaa ggagaggagg gccaaggccc agggcccaag gggagacctg
361 ggaagccctg accccccacc gaaacctctg cgtgttagga ataaggaagc tccagcaggg
421 gaggggacca agatgagaaa gaccaagaag aaagggtctg gggaggccga caaggacccc
481 tcagggagcc cagccagtgc gaggaagagc ccagcagcca tgtttctggt tggggaaggc
541 agtcctgaca agaaagccct gaagaagaaa ggcactccca aaggcgcgag gaaggaggaa
601 gaagaggagg aggaggcagc tacggtgata aagaacagca atcaaaaggg caaagccaaa
661 ggaaaaggca aaaagaaagc gaaggaggag agggccccgt ctccccccgt ggaggtggac
721 gaaccccggg agtttgtgct ccggcctgcc ccccagggcc gcacggtgcg ctgccggctg
781 acccgggaca aaaagggcat ggatcgaggc atgtatccct cctacttcct gcacctggac
841 acggagaaga aggtgttcct cttggctggc aggaaacgaa aacggagcaa gacagccaat
901 tacctcatct ccatcgaccc taccaatctg tcccgaggag gggagaattt catcgggaag
961 ctgaggtcca acctcctggg gaaccgcttc acggtctttg acaacgggca gaacccacag
1021 cgtgggtaca gcactaatgt ggcaagcctt cggcaggagc tggcagctgt gatctatgaa
1081 accaacgtgc tgggcttccg tggcccccgg cgcatgaccg tcatcattcc tggcatgagt
1141 gcggagaacg agagggtccc catccggccc cgaaatgcta gtgacggcct gctggtgcgc
1201 tggcagaaca agacgctgga gagcctcata gaactgcaca acaagccacc tgtctggaac
1261 gatgacagtg gctcctacac cctcaacttc caaggccggg tcacccaggc ctcagtcaag
1321 aacttccaga ttgtccacgc tgatgacccc gactatatcg tgctgcagtt cggccgcgtg
1381 gcggaggacg ccttcaccct agactaccgg tacccgctgt gcgccctgca ggccttcgcc
1441 atcgccctct ccagtttcga cgggaagctg gcctgcgagt gaccccagca gcccctcagc
1501 gcccccagag cccgtcagcg tgggggaaag gattcagtgg aggctggcag ggtccctcca
1561 gcaaagctcc cgcggaaaac tgctcctgtg tcggggctga cctctcactg cctctcggtg
1621 acctccgtcc tctccccagc ctggcacagg ccgaggcagg aggagcccgg acggcgggta
1681 ggacggagat gaagaacatc tggagttgga gccgcacatc tggtctcgga gctcgcctgc
1741 gccgctgtgc ccccctcctc cccgcgcccc agtcacttcc tgtccgggag cagtagtcat
1801 tgttgtttta acctcccctc tccccgggac cgcgctaggg ctccgaggag ctggggcggg
1861 ctaggaggag ggggtaggtg atgggggacg agggccaggc acccacatcc ccaataaagc
1921 cgcgtccttg gccaaaaaaa aaaaaaaa
//