LOCUS BC065220 3430 bp mRNA linear HUM 19-MAR-2007
DEFINITION Homo sapiens phosphofurin acidic cluster sorting protein 2, mRNA
(cDNA clone MGC:75311 IMAGE:5732786), complete cds.
ACCESSION BC065220
VERSION BC065220.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3430)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3430)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-JAN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Invitrogen
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 139 Row: i Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 59709422.
FEATURES Location/Qualifiers
source 1..3430
/db_xref="H-InvDB:HIT000261783"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:75311 IMAGE:5732786"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_124"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3430
/gene="PACS2"
/db_xref="GeneID:23241"
/db_xref="HGNC:HGNC:23794"
/db_xref="MIM:610423"
CDS 118..2787
/gene="PACS2"
/codon_start=1
/product="phosphofurin acidic cluster sorting protein 2"
/protein_id="AAH65220.2"
/db_xref="GeneID:23241"
/db_xref="HGNC:HGNC:23794"
/db_xref="MIM:610423"
/translation="MAERGRLGLPGAPGALNTPVPMNLFATWEVDGSSPSCVPRLCSL
TLKKLVVFKELEKELISVVIAVKMQGSKRILRSHEIVLPPSGQVETDLALTFSLQYPH
FLKREGNKLQIMLQRRKRYKNRTILGYKTLAAGSISMAEVMQHPSEGGQVLSLCSSIK
EAPVKAAEIWIASLSSQPIDHEDSTMQAGPKAKSTDNYSEEEYESFSSEQEASDDAVQ
GQDLDEDDFDVGKPKKQRRSIVRTTSMTRQQNFKQKVVALLRRFKVSDEVLDSEQDPA
EHIPEAEEDLDLLYDTLDMEHPSDSGPDMEDDDSVLSTPKPKLRPYFEGLSHSSSQTE
IGSIHSARSHKEPPSPADVPEKTRSLGGRQPSDSVSDTVALGVPGPREHPGQPEDSPE
AEASTLDVFTERLPPSGRITKTESLVIPSTRSEGKQAGRRGRSTSLKERQAARPQNER
ANSLDNERCPDARSQLQIPRKTVYDQLNHILISDDQLPENIILVNTSDWQGQFLSDVL
QRHTLPVVCTCSPADVQAAFSTIVSRIQRYCNCNSQPPTPVKIAVAGAQHYLSAILRL
FVEQLSHKTPDWLGYMRFLVIPLGSHPVARYLGSVDYRYNNFFQDLAWRDLFNKLEAQ
SAVQDTPDIVSRITQYIAGANCAHQLPIAEAMLTYKQKSPDEESSQKFIPFVGVVKVG
IVEPSSATSGDSDDAAPSGSGTLSSTPPSASPAAKEASPTPPSSPSVSGGLSSPSQGV
GAELMGLQVDYWTAAQPADRKRDAEKKDLPVTKNTLKCTFRSLQVSRLPSSGEAAATP
TMSMTVVTKEKNKKVMFLPKKAKDKDVESKSQCIEGISRLICTARQQQNMLRVLIDGV
ECSDVKFFQLAAQWSSHVKHFPICIFGHSKATF"
BASE COUNT 804 a 1105 c 1000 g 521 t
ORIGIN
1 ccgccgcccg gcagccatgt gaccgcgccg ccgccctccg cgcgcccggc ccgcccgccg
61 cgcgtccgcg gcccggccgc agccccaggc cgccgaggga gcggcggggc cggcgccatg
121 gccgagcgag gccgcctcgg cctccccggc gcgcccggcg cgctcaacac gcccgtgccc
181 atgaacctgt tcgccacctg ggaggtggac ggctccagcc ccagctgcgt gcccaggttg
241 tgcagcctga ctctgaagaa gctggtggtc ttcaaggagc tggagaagga gctgatctcc
301 gtggtgatcg ctgtcaagat gcagggctcc aaacgaatcc tgcggtccca tgagattgtg
361 ctgcccccca gtggacaagt ggagacagac ctggccctga ccttctcctt gcagtatcct
421 cacttcttga agagggaagg caacaagctt cagatcatgc tgcagcgcag aaagcgctac
481 aagaacagaa ccatcctggg ctacaagacg ctggccgcgg gctccatcag catggctgag
541 gtgatgcaac acccgtctga aggtggccag gtgctgagcc tctgcagcag catcaaggag
601 gcccccgtca aggcggccga gatctggatc gcctccctgt ccagccagcc cattgaccac
661 gaagacagca ccatgcaggc cggccccaag gccaagtcca cggataacta ctccgaggag
721 gagtatgaga gcttctcctc cgagcaggag gccagtgacg acgccgtgca ggggcaggac
781 ttggacgagg acgactttga cgtggggaag ccgaagaagc agcggagatc gattgtaaga
841 acgacgtcca tgaccaggca acagaacttc aagcagaaag tggtagcgct gctgcggagg
901 ttcaaagtgt ccgacgaggt cctggactcg gagcaggacc ctgcggagca catccccgag
961 gcagaggagg acctggacct cctgtatgac accctggaca tggagcaccc cagcgacagc
1021 ggccccgaca tggaggatga cgacagcgtc ctcagcaccc ccaagccgaa gctgcggcca
1081 tactttgaag gcctgtcgca ctcgagctcg cagacggaga ttgggagcat ccacagcgcc
1141 cgcagccaca aggagccccc aagcccggct gacgtgcccg agaagacgcg gtccctggga
1201 ggcaggcagc cgagcgacag tgtctctgac acggtggccc tcggtgtgcc aggcccgagg
1261 gagcaccctg gacagcctga ggacagcccc gaggctgagg cctccaccct ggatgtgttc
1321 acggagaggc tgccgcccag cgggaggatc accaagacag agtcccttgt catcccctcc
1381 accaggtccg aggggaagca ggctggccga cggggccgga gcacatcctt gaaggagcgg
1441 caggcagcac ggccccagaa tgagcgggcc aacagcctgg acaacgagcg ctgcccggac
1501 gcccggagcc agctacagat ccccaggaag actgtgtatg accagctcaa ccacatcctc
1561 atctccgatg accagcttcc cgaaaacatc atccttgtca acacctcgga ctggcagggg
1621 cagttcctct ccgacgtcct gcagaggcac acgctccccg tggtgtgcac gtgctctcct
1681 gcggacgtcc aggcggcctt cagcaccatc gtctcacgga tacagagata ctgcaactgc
1741 aattcccagc ccccgacccc cgtgaagatc gccgtggcgg gagcgcagca ttacctcagt
1801 gccatcctgc ggctctttgt ggagcagctg tcccacaaga cacccgactg gctcggctac
1861 atgcgcttcc tggtcatccc actgggctcc caccccgtgg ccaggtacct aggctccgtg
1921 gactaccgct acaacaactt cttccaggac ctggcctgga gagacctgtt caacaagctg
1981 gaggcccaga gtgcggtaca ggacacgcca gacattgtgt cacgcatcac gcagtacatc
2041 gcaggggcca actgtgccca ccagctcccc atcgcagagg ccatgctgac ctacaagcag
2101 aagagccctg acgaagagtc ctcccaaaag ttcattccct ttgtcggggt tgtgaaggtt
2161 ggaattgtgg agccatcctc ggccacatca ggcgactcgg acgacgcggc cccctcgggc
2221 tctggcacgc tctcctccac cccgccgtcc gcatctcctg cggccaagga ggcctcaccc
2281 accccgccct cctccccgtc ggtgagcgga ggcctgtcct cccccagcca gggtgtcggc
2341 gccgagctga tggggctgca ggtggactac tggacggcag cacagcctgc ggacaggaag
2401 agggacgccg agaagaagga cctgcctgtc accaaaaaca cgctcaagtg cactttccgg
2461 tccctccagg tcagcaggct gcccagcagc ggcgaggctg cagccacgcc caccatgtcc
2521 atgaccgtgg tcaccaagga gaagaacaag aaggtgatgt ttctgcccaa gaaagcgaag
2581 gacaaggacg tggagtctaa gagccagtgc attgagggca tcagccggct catctgcact
2641 gccaggcagc agcagaacat gctgcgggtc ctcatcgacg gcgtggagtg cagcgacgtc
2701 aagttcttcc agctggccgc gcagtggtcc tcgcacgtga agcacttccc catctgcatc
2761 ttcggacact ccaaggccac cttctagccc cacccaccag ggggcccacc tcctgcccca
2821 tgctgtgagg ggcccagctg catttctgtt aacatttcag tttactacag agacagacgc
2881 ttaaaacaca aagagaaaca gtcttaagta tgaatgtgct cacaacgtgg aaactaacgg
2941 gggagctcct gccaggagcc gaataactgc tctgcttatt aacccgaacg ttcggcccgg
3001 ggctgggaag ccagaaggac gatgctgagc catggatcgc ggaaggcgtc ctctggcctc
3061 aggagccacc cagagcctca caggctgagt tcttgcctct gtgtcctgtc cttcctggaa
3121 gtcaggactc tgcttcctca gggagcccgg ggaaggcgga gctcagtggc cacaggccga
3181 gggccatggg gccgctcagt cccgttgggg ttgtcctgag ttgagcctgg gggggccgtc
3241 ctgcccgcct aagagatgcc cccagcaccg cacactcgtg gttcccaata aactcctgcc
3301 tgcggcggag gttttatagc aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
3361 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
3421 aaaaaaaaaa
//