LOCUS BC065210 1392 bp mRNA linear HUM 03-FEB-2004
DEFINITION Homo sapiens chromosome 9 open reading frame 80, mRNA (cDNA clone
MGC:74505 IMAGE:3456693), complete cds.
ACCESSION BC065210
VERSION BC065210.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1392)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1392)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (12-JAN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 134 Row: a Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24308268.
FEATURES Location/Qualifiers
source 1..1392
/db_xref="H-InvDB:HIT000261773"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:74505 IMAGE:3456693"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1392
/gene="C9orf80"
/gene_synonym="HSPC043"
/db_xref="GeneID:58493"
CDS 176..490
/gene="C9orf80"
/gene_synonym="HSPC043"
/codon_start=1
/product="C9orf80 protein"
/protein_id="AAH65210.1"
/db_xref="GeneID:58493"
/translation="MAANSSGQGFQNKNRVAILAELDKEKRKLLMQNQSSTNHPGASI
ALSRPSLNKDFRDHAEQQHIAAQQKAALQHAHAHSSGYFITQDSAFGNLILPVLPRLD
PE"
BASE COUNT 442 a 274 c 275 g 401 t
ORIGIN
1 cgcagcgggg gcgggaaggt tgtagtgccg cgagttgagc tcctcttgcc taagtggtcg
61 cgcccccttt aagagcagcg attgtaagga gaggcggtcc cggtgtcctc gggtcccagg
121 tgattgtgaa gtgctgacca attgccactg gacatacttg aaacaaaata ggaaaatggc
181 agcaaactct tcaggacaag gttttcaaaa caaaaataga gttgcaatct tggcagaact
241 ggacaaagag aaaagaaaac tacttatgca gaaccagtct tcaacaaatc atcctggagc
301 tagcattgca ctctcgagac cctctcttaa taaggacttc cgggatcacg ctgagcagca
361 gcatattgca gcccaacaga aggcagcttt gcagcatgct catgcacatt catctggata
421 cttcatcact caagactctg catttgggaa ccttattctt cctgttttac ctcgccttga
481 cccagaatga agaaaacatt tgcgatggaa aagtgacttt gtaatatcaa atgccaaagc
541 tactatcatt cagtgctaca tgaactgtga ctttaagaat tttggtgaac tttgatattt
601 tttgtttgtc tgaaagaaag gaatgtgtaa gtgaaagctg aaagaagaat aaccaggatg
661 atgagagctg tggaagctgt atcgtccaag gaattgatta tgtaccgtga ctgtaacttt
721 tttgtaatgc tgtttaactc tcaatcagac tgtgaactgg atggtcacga agtcattccc
781 caactcctag caagtttgac tgaatatatc atgtccacag tagattttca agaatcattt
841 atagtactta actttaaaga aacaaggctg cttttaaaaa atgaactaat aggcttaaat
901 caattgcatc catatttgct gtttatagga ttgctatcag tatacctttt gcgtttatag
961 tcaacatgta tcatcctgaa atattctttc tggacttata actacttccc cctttttcac
1021 tttaaaacaa acctcaagaa taaattacta accagtctta accatctttt ataaacatat
1081 gctcttataa atgttgtgac tagatgcaat taaaaataat agggaatgtg gtaggttttt
1141 aatttgtaca tcctcttatt tagtgttacc acataaatga tgagtttgtg tggttctgtt
1201 ttccattttt gttctaactg aaaacttttt ggctgggcac ggtgcctcat gcctgtaatc
1261 ccagcacttt gggaggccta ggcaggcaga ttgcctaagc tcaggagttc gagaccagcc
1321 tgagcaacac agtgaaaccc catctctact aaaatacaaa aaaaaaaaaa aaaaaaaaaa
1381 aaaaaaaaaa aa
//