LOCUS BC065206 3040 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens chromosome 2 open reading frame 56, mRNA (cDNA clone
IMAGE:5192830), with apparent retained intron.
ACCESSION BC065206
VERSION BC065206.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3040)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3040)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-JAN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 135 Row: f Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 47524170
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..3040
/db_xref="H-InvDB:HIT000261769"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5192830"
/tissue_type="Brain, adult, 6 pooled whole brains"
/clone_lib="NIH_MGC_114"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 961 a 539 c 678 g 862 t
ORIGIN
1 agccccagct cctggcggag cgagctagcc tgcgaatttc agcatgagtg tactgctgag
61 gtcaggtttg gggccgttgt gtgccgtggc gcgcgcagcc attcctttta tttggagagg
121 gaaatacttc agctccggga atgagcctgc agaaaacccg gtgacgccga tgctgcggca
181 tcttatgtac aaaataaagt ctactggtcc catcactgtg gccgagtaca tgaaggaggt
241 gttgactaat ccagccaagg gttattatgt gtaccgtgac atgctaggcg aaaaaggaga
301 tttcattact tcacctgaaa taagtcaaat ctttggggag ctactaggta tatggttcat
361 tagtgaatgg atggccactg gaaaaagcac agctttccag ctggtggaac tgggcccagg
421 taggggaacc ctcgtgggag atattttgag ggtgttcact caacttggat ctgtgctgaa
481 aaattgtgac atttcagtac atctggtaga ggtaagccaa aaattaagtg agattcaagc
541 attgacactg actaaagaga aggtcccgtt agagcgaaat gctggatccc cagtgtatat
601 gaaaggtgtc actaagtctg ggattccaat ttcctggtac cgagatctgc acgatgttcc
661 aaaaggtaat tacctttatg tggattaatg aaagaatttt gatcacaacc ctcacagtat
721 tgatgggact gtaacttttt acagcaatat aatagattga gttactgctg ccaagtccct
781 tatccataga gagtagccta cttttttcta gaaaagagca tcttaataga aaataaagtt
841 gcctgacatt aagtagtagt ttatttcatg aagctttgta aaatcccaaa caaaatgtaa
901 atctcctttg tacttttgag tatttcccta tagctagggt tgtaccgatg acggagcagc
961 ccaaggcagc tggggctgat ggaagcagtg ttagtaggtg ggtttagttc agttatagag
1021 tcttttaaaa aatccttact tgcctaaaga caagcaaggt gtgggggaaa atccctgtac
1081 tagtcaggaa tactgactag tattgactag tttgagtctt gactcaaagc caaagtgggg
1141 gtacgatctt gggtaaggga tctcaagcca ttcctgcctc agccttctca ggctgagaag
1201 cccgatttta tgaaatcaaa ttcccttcca gctaacaact ctgacttcta atttctttca
1261 agccttgtga tgaataaaag ctttaactgc tatttcaggt atttccattt tctgacccca
1321 tttatgtgta aaataagaat agtaataatt gttctatgtt ctgcagtgta agttttccat
1381 gaagaggtag ataattctgt ggtagtgatg attatggagg aagtaggcat tttttttaca
1441 gttaatattc aaaagaatta attcctgtga aatgtggaaa cattaattgt tttcctcttt
1501 ttaaataggg tacagctttt atcttgcaca tgaatttttt gatgttcttc ctgtgcataa
1561 atttcaggtt tctgataaac tgaggtttgt tttggcacct tctgccaccc cagcagaagc
1621 cttcatacaa catgacgaaa caagggatca tgttgaagtg tgtcctgatg ctggtgttat
1681 catcgaggaa ctttctcaac gcattgcatt aactggaggt gctgcactgg ttgctgatta
1741 tggtcatgat ggaacaaaga cagatacctt cagagggttt tgcgaccaca agcttcatga
1801 tgtcttaatt gccccaggaa cagcagatct aacagctgat gtggacttca gttatttgcg
1861 aagaatggca cagggaaaag tagcctctct gggcccaata aaacaacaca catttttaaa
1921 aaatatgggt attgatgtcc ggctgaaggt tcttttagat aaatcaaatg agccatcagt
1981 gaggcagcag ttacttcaag gatatgatat gttaatgaat ccaaagaaga tgggagagag
2041 atttaacttt tttgccttgc tacctcatca gagacttcaa ggtggaagat atcagaggaa
2101 tgcacgtcag tcaaaaccct ttgcatccgt tgtagctggg tttagtgaac ttgcttggca
2161 gtgatatttc agcttggaca ttttaccctt cagtcggccc aagaaatcaa aataaaggaa
2221 acacatttca tatactgcag gtaacaaaag tcaaagtatt ttatcttttc acagcaagaa
2281 cagtccatgt tgtatataat acaaccaaca ttatagaact tttagggttg tgactggctt
2341 tggtgcaaat gtgtgctcaa gctaataagt tattgtgaaa ctgagtttcc tttaacttac
2401 aaagctagtt gccatatttc tattttattt taaaaagtaa acatgcggct gggcgtggtg
2461 gctcatgcct gtaatcccag cactttggga ggctgaggtg ggcatatcac ctgaggtcag
2521 cagttaaaga ccagcctgac caaaatggag aaaccccatc tctactaaaa atacaaaact
2581 agccgggtat ggtggtacat gcctgtaatc ccagctactc aggaggctga gacaggagaa
2641 tcacttgaac ctgggaggtg gaggttgcgg tgagctgaga tcgtgccact gcactccagc
2701 ctgggcaaca agagcaaaaa tccctctcaa aaaaaaaagt aaacatgggc actgattgtt
2761 ttaataaaaa tgggaaacag actaaatggc tattcacagg aaactgataa gatatatgtt
2821 atttttttaa atgagctagg gcaatatgtt ttgacagaaa actctctaag atttagtaag
2881 tgaaaaaaag taggatgcaa gagtttttat agttgattcc atttttgttg aaggagaaaa
2941 actaaataaa tacgagtaat ttcatagaaa cgaaaaaaaa aaaaaaaaaa aaaaaaaaaa
3001 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//