LOCUS BC065198 2820 bp mRNA linear HUM 03-FEB-2004
DEFINITION Homo sapiens LUC7-like (S. cerevisiae), mRNA (cDNA clone MGC:74654
IMAGE:5212471), complete cds.
ACCESSION BC065198
VERSION BC065198.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2820)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2820)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (12-JAN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 135 Row: i Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21359922.
FEATURES Location/Qualifiers
source 1..2820
/db_xref="H-InvDB:HIT000261761"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:74654 IMAGE:5212471"
/tissue_type="Blood, adult leukocytes"
/clone_lib="NIH_MGC_118"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2820
/gene="LUC7L"
/gene_synonym="FLJ10231"
/gene_synonym="LUC7-LIKE"
/gene_synonym="LUC7B1"
/gene_synonym="SR+89"
/db_xref="GeneID:55692"
/db_xref="MIM:607782"
CDS 1412..2476
/gene="LUC7L"
/gene_synonym="FLJ10231"
/gene_synonym="LUC7-LIKE"
/gene_synonym="LUC7B1"
/gene_synonym="SR+89"
/codon_start=1
/product="LUC7L protein"
/protein_id="AAH65198.1"
/db_xref="GeneID:55692"
/db_xref="MIM:607782"
/translation="MQMGDETRQRVKFTDDRVCKSHLLDCCPHDILAGTRMDLGECTK
IHDLALRADYEIASKERDLFFELDAMDHLESFIAECDRRTELAKKRLAETQEEISAEV
SAKAEKVHELNEEIGKLLAKAEQLGAEGNVDESQKILMEVEKVRAKKKEAEEEYRNSM
PASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGFIQIREKLDQLRKTVAEK
QEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRS
RSRDRHRRHRSRSRSHSRGHRRASRDRSAKYKFSRERASREESWESGRSERGPPDWRL
ESSNGKMASRRSEEKEAGEI"
misc_feature 1421..2077
/gene="LUC7L"
/gene_synonym="FLJ10231"
/gene_synonym="LUC7-LIKE"
/gene_synonym="LUC7B1"
/gene_synonym="SR+89"
/note="LUC7; Region: LUC7 N_terminus. This family contains
the N terminal region of several LUC7 protein homologues
and only contains eukaryotic proteins. LUC7 has been shown
to be a U1 snRNA associated protein with a role in splice
site recognition. The family also contains human and mouse
LUC7 like (LUC7L) proteins and human cisplatin
resistance-associated overexpressed protein (CROP)"
/db_xref="CDD:pfam03194"
BASE COUNT 762 a 653 c 760 g 645 t
ORIGIN
1 cgacgccgct gccaccgcct gcctgagaga agtcgtcgcg gccgaccccg tcgcctccgc
61 cggctaccat gtccgcccag gcgcagatgc gggccctgct ggaccagctc atgggcacgg
121 ctcgggacgg tgagtcagag cggccaacca ggcgagggtc tggggtggga gtgaggcgag
181 gccgccgggc ggcctgaggc gggggccgcg atcgtctgcg cctgcgcctg cgcggggcat
241 cgctcctcct cccccgcgct ccgaccgcag gcgccgggcc tttgtctaag ccggtgcgtc
301 tctgaggcgg ccgtgggtcc aggtcgggct cctctctcgg agtctgcgcc atggatgggg
361 cttcagcctc cttcctatgt accgtcctgc tacttcctcc ccggcgggcg ccgcggctcc
421 gtgcccctcc gcgaactgtg gagtcggcgg agggctggaa tcagcgtggg ctccaggtcg
481 ctggcagccg ggtggcagaa ctcttccgag gctccttggg aagaagctac acccgaggga
541 gccggatggg cctcgaaaac ctggcccgct ctggttctgt accattgcaa ggggaaccgt
601 aaactgagct tttctaacgt gggtttctgc caagtacttt tccagctgcc cccttccccc
661 cagcacacag gagagcctct gtgtagccag cgcttgacag tcgttaggta ggttgtactg
721 tgtagggagg agctcaagat catgatggtt gtcacaggag aaagcggttg catctttgca
781 aaactatata cctgctgtgg tttgtgtttt cttttctgct gagtaatgaa gttgtaagtt
841 cacactggca cattctcagg gctgtgcaga ttatttgcac tttatttcat aggtgaataa
901 gtgcttttta gctttctttg tatattgagt tgcttttgaa ttgcttccca tatttttatt
961 tcatacaaac tgaacaattg tggcccctct attttattta taaaggttca gtgtatcttt
1021 gcctgcctac atcaatctgc aagggagttg cagaaagcct catgttcatc gagccgtgag
1081 tcacaaccaa tttctaagct gttataacaa aaaagtgttt gctttttttc acaagtaact
1141 ttaaaagtgt agtttagaaa gaaaacattt tcaataaaaa gacactacat taatcctgga
1201 tgcttgcaaa tcctaaaata tattcctcct ctagcgttgc acagctctgt gttgtataca
1261 cagactagct ttaaaatttg tcacatacca ctttaccttt acttttatgt atcattcccc
1321 cgacttcctt actgcaggtg tgggcaagaa aacttttcct ttaacacttt tcaacagcgg
1381 gcataaaatt ctgcagctga ggtcttgaag aatgcagatg ggagacgaaa ccagacagag
1441 ggtcaagttt acagatgacc gtgtctgcaa gagtcacctt ctggactgct gcccccatga
1501 catcctggct gggacgcgca tggatttagg agaatgtacc aaaatccacg acttggccct
1561 ccgagcagat tatgagattg caagtaaaga aagagacctg ttttttgaat tagatgcaat
1621 ggatcacttg gagtccttta ttgctgaatg tgatcggaga actgagctcg ccaagaagcg
1681 gctggcagaa acacaggagg aaatcagtgc ggaagtttct gcaaaggcag aaaaagtaca
1741 tgagttaaat gaagaaatag gaaaactcct tgctaaagcc gaacagctag gggctgaagg
1801 taatgtggat gaatcccaga agattcttat ggaagtggaa aaagttcgtg cgaagaaaaa
1861 agaagctgag gaagaataca gaaattccat gcctgcatcc agttttcagc agcaaaagct
1921 gcgtgtctgc gaggtctgtt cagcctacct tggtctccat gacaatgacc gtcgcctggc
1981 agaccacttc ggtggcaagt tacacttggg gttcattcag atccgagaga agcttgatca
2041 gttgaggaaa actgtcgctg aaaagcagga gaagagaaat caggatcgct tgaggaggag
2101 agaggagagg gaacgggagg agcgtctgag caggaggtcg ggatcaagaa ccagagatcg
2161 caggaggtca cgctcccggg atcggcgtcg gaggcggtca agatctacct cccgagagcg
2221 acggaaattg tcccggtccc ggtcccgaga tagacatcgg cgccaccgca gccgttcccg
2281 gagccacagc cggggacatc gtcgggcttc ccgggaccga agtgcgaaat acaagttctc
2341 cagagagcgg gcatccagag aggagtcctg ggagagcggg cggagcgagc gagggccccc
2401 ggactggagg cttgagagct ccaacgggaa gatggcttca cggaggtcag aagagaagga
2461 ggccggcgag atctgaaccc gtctcccggg tgctgtaaat agtctgataa acgttcacac
2521 agtctaaaat taccctttat atttgctgaa tacaactcat cttttgtagt ttaaaatttc
2581 tattgttttg gagctagctg tgagtttcta gaagtgtaca gagttgctcc tgtgttcccg
2641 ggtcatgttg agtaggaata aataaatctg atgctgcctc ctgaggctgc ggggggtttc
2701 tgctgaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2761 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//