LOCUS BC065033 1960 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens solute carrier family 48 (heme transporter), member 1,
mRNA (cDNA clone MGC:74980 IMAGE:6147682), complete cds.
ACCESSION BC065033
VERSION BC065033.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1960)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1960)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JAN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 140 Row: j Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 8923451.
FEATURES Location/Qualifiers
source 1..1960
/db_xref="H-InvDB:HIT000261735"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:74980 IMAGE:6147682"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1960
/gene="SLC48A1"
/gene_synonym="hHRG-1"
/gene_synonym="HRG1"
/db_xref="GeneID:55652"
/db_xref="HGNC:HGNC:26035"
/db_xref="MIM:612187"
CDS 70..510
/gene="SLC48A1"
/gene_synonym="hHRG-1"
/gene_synonym="HRG1"
/codon_start=1
/product="SLC48A1 protein"
/protein_id="AAH65033.1"
/db_xref="GeneID:55652"
/db_xref="HGNC:HGNC:26035"
/db_xref="MIM:612187"
/translation="MAPSRLQLGLRAAYSGISSVAGFSIFLVWTVVYRQPGTAAMGGL
AGVLALWVLVTHVMYMQDYWRTWLKGLRGFFFVGVLFSAVSIAAFCTFLVLAITRHQS
LTDPTSYYLSSVWSFISFKWAFLLSLYAHRYRADFADISILSDF"
BASE COUNT 402 a 606 c 481 g 471 t
ORIGIN
1 gcggcttcgg gccctgcacc tgtgactctc ggccgcgctc gccctcggcc cgcccggcgc
61 cgcagcccca tggccccgtc caggctgcag ctcggcctcc gcgccgccta ctccggcatc
121 agctccgtgg ccggcttctc catcttcctc gtctggacgg tggtctaccg acagccgggg
181 accgcggcca tgggagggct cgcaggggtg ctggcactgt gggtcctggt gacgcacgtg
241 atgtacatgc aagattattg gaggacctgg ctcaaggggc tgcgcggctt cttcttcgtg
301 ggcgtcctct tctcggccgt ctccatcgct gccttctgca ccttcctcgt gctggccatc
361 acccggcatc agagcctcac agaccccacc agctactacc tctccagcgt ctggagcttc
421 atttccttca agtgggcctt cctgctcagc ctctatgccc accgctaccg ggctgacttt
481 gctgacatca gcatcctcag cgatttctga cccagggggt gaggtctctg caccctgggg
541 gggccttagg acctggactc agcctctgag atgttgggag aggctactcc caccccctgg
601 tgaccccaga actgtggcag aaaatacaca gcaggacgag tgtggtctcc caggaagctg
661 tcctgcccgt cccctttcga ggaaacctga gtgtggtaga gaggggatcc tgccatgttg
721 ctcctcatca gcctggccag agggcagctt tagacctttt caaatgaatc tgttttcttt
781 tctttctttt ttttttcttt tttttttttt ttttgagatg gagtcttact ctgtcaccca
841 ggctggagtg cagtagtgcg atctcagctc actgcaacct ccgcctccca ggttcaagca
901 attctcctgc cttggcctct caagtagctg ggattacagg catctgccac catgcccggc
961 aaatttttgt gtttttagta gagacagggt tttgccatgt tggccaggct ggtctcgaac
1021 tcctgatctc aggtgattca cccgcctcag ccttccaaag tgctgggatt ataggtgtga
1081 gccaccgtgc ccggcctgga tctgttttct tagcacgcag tgaggaatct ttgtacttaa
1141 ggccagggca acaaagtcaa gaggtcaagg tgtagggcca tgaggcctgg acctatgctg
1201 caggcaaggg tttccatccc cgctgcccta ggcactctct tcccaaggcc aggttgggca
1261 cctggggagg tcagttcaga aatatctagc agagacctct taaaccccca tcccagcacc
1321 ccatcctgtt gttcccagag ctggtctccc atgagtgtgc tagagccaga tagccgtggc
1381 cccccaccca tctcactcac acacacaggc atccatacac cccagaagac ttcccaaatg
1441 aggccagact cagggtcacg gggaatgtgc ttctgcccct gtaagggctt tggggaaggg
1501 ggcaacatag tagaggctgg aaagagcccc caaacctgtg cccatgcccc tccagccctg
1561 cgtttccatt ctgccttctc agagtgccct tgctgcaccc agaccaccgg ccaggagaga
1621 ccttctctcc cactccagcc cctctcactg cccttcaact agagctttca cctttttaca
1681 tttcccttct gaaggacaca aatctgcttt tctgcccata cactggccca agggctcacc
1741 taacttggga gggaaggggc tgttggtaca aggatgattt tctgttagac tgccattttg
1801 cacggtctcc cccttcccat ctgatgtgtc ctgcccctca gctctttgcc ttatctgtgt
1861 cactgtcact ttagcaaaaa tacagcggcc atttgtatca aaaaaaaaaa aaaaaaaaaa
1921 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
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