LOCUS BC065020 1043 bp mRNA linear HTC 01-SEP-2006 DEFINITION Homo sapiens FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived), mRNA (cDNA clone IMAGE:6047510), with apparent retained intron. ACCESSION BC065020 VERSION BC065020.1 KEYWORDS HTC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1043) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1043) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-JAN-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 140 Row: d Column: 1 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 48928036 This clone has the following problem: retained intron. FEATURES Location/Qualifiers source 1..1043 /db_xref="H-InvDB:HIT000261723" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:6047510" /tissue_type="Skin, melanotic melanoma." /clone_lib="NIH_MGC_72" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" BASE COUNT 301 a 208 c 233 g 301 t ORIGIN 1 agccgccggc gctgtggaga tattctctaa gccgctttca tcatgggaga aatagagcag 61 aggccgaccc caggatcacg actgggggcc ccggaaaatt cggggatcag taccttggaa 121 cgtggacaga agccgccccc aacaccttca ggaaaactcg tgtccatcaa aatccagatg 181 ctggatgaca cccaggaggc atttgaagtt ccaatggtgt cctcatcctc cttcctcaaa 241 gccatcggct cctcctggac gggttgggta ctgagatgct ccatgaagcc caagcaccat 301 tcacatctaa ttgagaagtt tggagaggac agaattctca ctcatcttac aggctctatt 361 tcttacacaa actgggctgg aagtagaagc ttagcggtca cagtcactga agagcttctt 421 aatctttttt gagtcaggac ttgaagtcct gtttcattat ttcattcaaa gaaattgatt 481 ggcaatggcc agagttaaat tcaaaggtga cattaacaca tttcagtgcc caataagtga 541 tttttctgct gggtaggagt agatacagat gtgatctcag atacgtgaag ctgcatacag 601 aggggcccat ccactcctaa gcgggtctcc aggaggcttg gtttgatcta ctagatttgg 661 tgcctcttaa agggaagcaa tacagctttt ctgctgtggg ttgtttgcca ctaggggaag 721 attcatttct attccagcca taaattagac caaagagagg gatttggttt attgctagtg 781 cagaagttaa aaaccatctt cctttcctga gtggtctctt aattagattc tttagttttt 841 aaatgttaac tggaattgct gaagtttaat tcctgaaagg gtttagtttt taaaaggagt 901 acctcattta ccatattact gtgttctgag aaatctacag taatttttgt gtaacttttt 961 tattcaaaga atggattgtt aattgtaaag ccatttagaa aggcgaataa agtcagatct 1021 actttaaaaa aaaaaaaaaa aaa //