LOCUS BC065019 1513 bp mRNA linear HUM 04-AUG-2008
DEFINITION Homo sapiens pantothenate kinase 2, mRNA (cDNA clone
IMAGE:6015090), partial cds.
ACCESSION BC065019
VERSION BC065019.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1513)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1513)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JAN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 140 Row: b Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24430176.
FEATURES Location/Qualifiers
source 1..1513
/db_xref="H-InvDB:HIT000261722"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6015090"
/tissue_type="Testis, embryonal carcinoma"
/clone_lib="NIH_MGC_92"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1513
/gene="PANK2"
/gene_synonym="HARP"
/gene_synonym="HSS"
/gene_synonym="PKAN"
/db_xref="GeneID:80025"
/db_xref="HGNC:HGNC:15894"
/db_xref="MIM:606157"
CDS <1..1162
/gene="PANK2"
/gene_synonym="HARP"
/gene_synonym="HSS"
/gene_synonym="PKAN"
/codon_start=2
/product="PANK2 protein"
/protein_id="AAH65019.1"
/db_xref="GeneID:80025"
/db_xref="HGNC:HGNC:15894"
/db_xref="MIM:606157"
/translation="SGRVGPAGGLGCSESGTFGGPPAPIVFPWFGLDIGGTLVKLVYF
EPKDITAEEEEEEVESLKSIRKYLTSNVAYGSTGIRDVHLELKDLTLCGRKGNLHFIR
FPTHDMPAFIQMGRDKNFSSLHTVFCATGGGAYKFEQDFLTIGDLQLCKLDELDCLIK
GILYIDSVGFNGRSQCYYFENPADSEKCQKLPFDLKNPYPLLLVNIGSGVSILAVYSK
DNYKRVTGTSLGGGTFFGLCCLLTGCTTFEEALEMASRGDSTKVDKLVRDIYGGDYER
FGLPGWAVASSFGNMMSKEKREAVSKEDLARATLITITNNIGSIARMCALNENINQVV
FVGNFLRINTIAMRLLAYALDYWSKGQLKALFSEHEGYFGAVGALLELLKIP"
BASE COUNT 431 a 291 c 369 g 422 t
ORIGIN
1 gtccggacgc gtgggtccgg ctggaggcct cgggtgctcc gaaagcggta ccttcggggg
61 cccccccgca cccattgttt ttccatggtt tggactggat atcggtggaa ctctggtcaa
121 gctggtatat tttgaaccca aagacatcac tgctgaagaa gaagaggaag aagtggaaag
181 tcttaaaagc attcggaagt acctgacctc caatgtggct tatgggtcta caggcattcg
241 ggacgtgcac ctcgagctga aggacctgac tctgtgtgga cgcaaaggca atctgcactt
301 tatacgcttt cccactcatg acatgcctgc ttttattcaa atgggcagag ataaaaactt
361 ctcgagtctc cacactgtct tttgtgccac tggaggtgga gcgtacaaat ttgagcagga
421 ttttctcaca ataggtgatc ttcagctttg caaactggat gaactagatt gcttgatcaa
481 aggaatttta tacattgact cagtcggatt caatggacgg tcacagtgct attactttga
541 aaaccctgct gattctgaaa agtgtcagaa gttaccattt gatttgaaaa atccgtatcc
601 tctgcttctg gtgaacattg gctcaggggt tagcatctta gcagtatatt ccaaagataa
661 ttacaaacgg gtcacaggta ctagtcttgg aggaggaact ttttttggtc tctgctgtct
721 tcttactggc tgtaccactt ttgaagaagc tcttgaaatg gcatctcgtg gagatagcac
781 caaagtggat aaactagtac gagatattta tggaggggac tatgagaggt ttggactgcc
841 aggctgggct gtggcttcaa gctttggaaa catgatgagc aaggagaagc gagaggctgt
901 cagtaaagag gacctggcca gagcgacttt gatcaccatc accaacaaca ttggctcaat
961 agcaagaatg tgtgccctta atgaaaacat taaccaggtg gtatttgttg gaaatttctt
1021 gagaattaat acgatcgcca tgcggctttt ggcatatgct ttggattatt ggtccaaggg
1081 gcagttgaaa gcactttttt cggaacacga gggttatttt ggagctgttg gagcactcct
1141 tgagctgttg aagatcccgt gatcattacc tggggagggg ttcctgaaac cttccacaat
1201 gggatctgtg gactttcatt tttttaagag acttactcaa tttcatgact gtactacctg
1261 aaacaaagtg agaaaggaca ggtgtatttt tctaagtcat caagataaat ccttaagaat
1321 tcagtctaaa ttagcaacca ggaaggaaaa atatattaaa aacaacaaaa aagtggcaca
1381 tgtccaggca gtgtgaggat ttgctgtata taagttgcct gctttgtatt tttgaaatct
1441 ctgcatcact cattggaagt gcttctgaag agagctgctc tgtgttcaaa aaaaaaaaaa
1501 aaaaaaaaaa aaa
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