LOCUS BC065016 2973 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens AFG3 ATPase family gene 3-like 2 (yeast), mRNA (cDNA
clone MGC:70766 IMAGE:6169804), complete cds.
ACCESSION BC065016
VERSION BC065016.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2973)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2973)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JAN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 140 Row: o Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5802969.
FEATURES Location/Qualifiers
source 1..2973
/db_xref="H-InvDB:HIT000261719"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:70766 IMAGE:6169804"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2973
/gene="AFG3L2"
/db_xref="GeneID:10939"
/db_xref="HGNC:HGNC:315"
/db_xref="MIM:604581"
CDS 117..2510
/gene="AFG3L2"
/codon_start=1
/product="AFG3 ATPase family gene 3-like 2 (yeast)"
/protein_id="AAH65016.1"
/db_xref="GeneID:10939"
/db_xref="HGNC:HGNC:315"
/db_xref="MIM:604581"
/translation="MAHRCLRLWGRGGCWPRGLQQLLVPGGVGPGEQPCLRTLYRFVT
TQARASRNSLLTDIIAAYQRFCSRPPKGFEKYFPNGKNGKKASEPKEVMGEKKESKPA
ATTRSSGGGGGGGGKRGGKKDDSHWWSRFQKGDIPWDDKDFRMFFLWTALFWGGVMFY
LLLKRSGREITWKDFVNNYLSKGVVDRLEVVNKRFVRVTFTPGKTPVDGQYVWFNIGS
VDTFERNLETLQQELGIEGENRVPVVYIAESDGSFLLSMLPTVLIIAFLLYTIRRGPA
GIGRTGRGMGGLFSVGETTAKVLKDEIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQ
DLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDL
FALARKNAPCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVIL
AGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKDKLARK
LASLTPGFSGADVANVCNEAALIAARHLSDSINQKHFEQAIERVIGGLEKKTQVLQPE
EKKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGKGLGYAQYLPKEQYLYTKEQLLDR
MCMTLGGRVSEEIFFGRITTGAQDDLRKVTQSAYAQIVQFGMNEKVGQISFDLPRQGD
MVLEKPYSEATARLIDDEVRILINDAYKRTVALLTEKKADVEKVALLLLEKEVLDKND
MVELLGPRPFAEKSTYEEFVEGTGSLDEDTSLPEGLKDWNKEREKEKEEPPGEKVAN"
BASE COUNT 783 a 652 c 834 g 704 t
ORIGIN
1 gcgcgcttcg ctgcctggcg gcctttcccc gagccgagcc cgcttcccga ggccgccagt
61 cgtcgcctgc ccgcgcctgc gcagcgtccc gggccgagag ggccacggcg gcggccatgg
121 cgcaccgctg tttgcggctg tggggccggg gcggctgctg gccccgcggc ctacagcagc
181 tcctcgtgcc tggcggcgtg ggcccgggcg agcagccctg cctccggacg ctttaccgat
241 ttgttacaac tcaagcaagg gccagcagaa attctctttt gacagatata attgctgctt
301 atcaaagatt ctgttctcga cccccaaaag gatttgaaaa atactttcct aatggaaaaa
361 atggaaaaaa agctagtgaa cctaaagaag ttatgggaga gaaaaaagaa tcaaagccag
421 ctgctaccac acgctcttct ggaggaggag gtggtggcgg tggaaaacga ggtggcaaga
481 aagatgattc tcactggtgg tccaggtttc agaagggtga cattccatgg gacgacaagg
541 atttcaggat gttcttcctc tggactgctc tgttctgggg tggagtcatg ttttacttgc
601 tgctcaagag atccgggaga gaaatcactt ggaaggactt tgtcaataac tatctttcaa
661 aaggagtagt agacagattg gaagtcgtca acaagcgttt tgttcgagtg acctttacac
721 caggaaaaac tcctgttgat gggcaatacg tttggtttaa tattggcagt gtggacacct
781 ttgaacggaa tctggaaact ttacagcagg aattgggcat agaaggagaa aatcgggtgc
841 ctgttgtcta cattgctgaa agtgatggct cttttctgct gagcatgctg cctacggtgc
901 tcatcatcgc cttcttgctc tacaccatca gaagagggcc tgctggcatt ggccggacag
961 gccgagggat gggcggactc ttcagtgtcg gagaaaccac tgccaaggtc ttaaaggatg
1021 aaattgatgt gaagttcaaa gatgtggctg gctgtgagga ggccaagcta gagatcatgg
1081 aatttgtgaa tttcttgaaa aacccaaagc agtatcaaga cctaggagca aaaatcccaa
1141 agggtgccat tctcactggt cctccaggca ctgggaagac gctgctagct aaggccacag
1201 ccggagaagc caatgtcccc ttcatcaccg ttagtggatc tgagtttttg gagatgttcg
1261 ttggtgtggg ccctgctaga gtccgagact tatttgccct tgctcggaag aatgcccctt
1321 gcatcctctt catcgatgaa atcgatgcgg tgggaaggaa gagaggaaga ggcaactttg
1381 gagggcagag tgagcaggag aacacactca accagctgct ggtggagatg gatggtttta
1441 atacaacaac aaatgtcgtc attttggccg gcaccaatcg accagatatc ctggaccccg
1501 cgctacttag gccggggcgt ttcgacaggc agatctttat tggaccacca gacataaaag
1561 gaagagcttc tattttcaaa gttcatctcc gaccgctaaa actggacagt accctggaga
1621 aggataaatt ggcaagaaaa ctggcatctt taactccagg gttttcaggt gctgatgttg
1681 ctaatgtctg taatgaagct gcgttgattg ctgcaaggca tctgtcagat tccataaatc
1741 agaaacactt tgaacaggca attgagcgag tgattggtgg cttagagaag aaaacgcagg
1801 ttctgcagcc tgaggagaag aagactgtgg cataccacga agcaggccat gcggttgccg
1861 gctggtatct ggagcacgca gacccgcttt taaaggtatc catcatccca cgtggcaaag
1921 gactaggtta tgctcagtat ttaccaaaag aacaatacct ctataccaaa gagcagctct
1981 tggataggat gtgtatgact ttaggtggtc gagtctctga agaaatcttc tttggaagaa
2041 ttacaactgg tgctcaagat gacttgagaa aagtaactca gagtgcatat gcccaaattg
2101 ttcagtttgg catgaatgaa aaggttgggc aaatctcctt tgacctccca cgtcaggggg
2161 acatggtatt ggagaaacct tacagtgaag ccactgcaag attgatagat gatgaagtac
2221 gaatacttat taatgatgct tataaaagaa cagtagctct tctcacagaa aagaaagctg
2281 acgtggagaa ggttgctctt ctgttgttag aaaaagaagt attagataag aatgatatgg
2341 ttgaactttt gggccccaga ccatttgcgg aaaaatctac ctatgaagaa tttgtggaag
2401 gcactggcag cttggatgag gacacctcac ttccagaagg ccttaaggac tggaacaagg
2461 agcgggaaaa ggagaaagag gagcccccgg gtgagaaagt tgccaactag aggcccagag
2521 ggaggccatc tcagtctgtc cactgtggtt tcagctggtg cattatttca gctgtggctt
2581 tcagaagaat gggaatgctg cgctgatttt agccagccac tggcccagct gaaatgatgg
2641 ggaaaggagt ccttagtcct ttcagcctca gaggtcacag tgggtggcag gtgactttcc
2701 ggaggccttg agggaaatgc acactgtccc atagcctcat tgggctccca gacgtgctgg
2761 aaaggttgag cccagagtgg ccgaggctgg accctgtggc accaagtggg gtcggctgac
2821 cgtgtggcag ggatcgttgc actggactct tggcgtgtgg gaagggatgc tttctctttg
2881 tcgcccactc ttcattcctg tttctcctca gttcccctgt gcagatgggc tgtgaaatta
2941 aattggagtc ttgataagaa aaaaaaaaaa aaa
//