LOCUS BC065014 2639 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens membrane-associated ring finger (C3HC4) 7, mRNA (cDNA
clone MGC:70687 IMAGE:6169288), complete cds.
ACCESSION BC065014
VERSION BC065014.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2639)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2639)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JAN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 140 Row: o Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 53828927.
FEATURES Location/Qualifiers
source 1..2639
/db_xref="H-InvDB:HIT000261717"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:70687 IMAGE:6169288"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2639
/gene="MARCH7"
/gene_synonym="AXO"
/gene_synonym="DKFZP586F1122"
/gene_synonym="MARCH-VII"
/gene_synonym="RNF177"
/db_xref="GeneID:64844"
/db_xref="HGNC:HGNC:17393"
CDS 89..2203
/gene="MARCH7"
/gene_synonym="AXO"
/gene_synonym="DKFZP586F1122"
/gene_synonym="MARCH-VII"
/gene_synonym="RNF177"
/codon_start=1
/product="membrane-associated ring finger (C3HC4) 7"
/protein_id="AAH65014.1"
/db_xref="GeneID:64844"
/db_xref="HGNC:HGNC:17393"
/translation="MESKPSRIPRRISVQPSSSLSARMMSGSRGSSLNDTYHSRDSSF
RLDSEYQSTSASASASPFQSAWYSESEITQGARSRSQNQQRDHDSKRPKLSCTNCTTS
AGRNVGNGLNTLSDSSWRHSQVPRSSSMVLGSFGTDLMRERRDLERRTDSSISNLMDY
SHRSGDFTTSSYVQDRVPSYSQGARPKENSMSTLQLNTSSTNHQLPSEHQTILSSRDS
RNSLRSNFSSRESESSRSNTQPGFSYSSSRDEAPIISNSERVVSSQRPFQESSDNEGR
RTTRRLLSRIASSMSSTFFSRRSSQDSLNTRSLNSENSYVSPRILTASQSRSNVPSAS
EVPDNRASEASQGFRFLRRRWGLSSLSHNHSSESDSENFNQESEGRNTGPWLSSSLRN
RCTPLFSRRRREGRDESSRIPTSDTSSRSHIFRRESNEVVHLEAQNDPLGAAANRPQA
SAASSSATTGGSTSDSAQGGRNTGISGILPGSLFRFAVPPALGSNLTDNVMITVDIIP
SGWNSADGKSDKTKSAPSRDPERLQKIKESLLLEDSEEEEGDLCRICQMAAASSSNLL
IEPCKCTGSLQYVHQDCMKKWLQAKINSGSSLEAVTTCELCKEKLELNLEDFDIHELH
RAHANEQAEYEFISSGLYLVVLLHLCEQSFSDMMGNTNEPSTRVRFINLARTLQAHME
DLETSEDDSEEDGDHNRTFDIA"
BASE COUNT 866 a 496 c 528 g 749 t
ORIGIN
1 cgggcgccat tgtgcttcgc tgccgactgc atttcctcag tcacgggcct agaactccaa
61 ggagaaaggc ggcgaaaaat ctttaagaat ggagtctaaa ccttcaagga ttccaagaag
121 aatttctgtt caaccttcca gctccttaag tgctaggatg atgtctggaa gcagaggaag
181 tagtttaaat gatacctatc actcaagaga ctcttcattt agattggatt ctgaatatca
241 gtctacatca gcatcagcat ctgcgtcacc atttcaatct gcatggtata gtgaatctga
301 gataactcag ggagcacgct caagatcgca gaaccagcaa cgggatcatg attcaaaaag
361 acctaaactt tcctgtacaa actgtactac ctcagctggg agaaatgttg gaaatggttt
421 aaacacatta tcagattcat cttggaggca tagtcaagtt cctagatctt catcaatggt
481 acttggatca tttggaacag acttaatgag agagaggaga gatttggaga gaagaacaga
541 ttcctctatt agtaatctta tggattatag tcaccgaagt ggtgatttca caacttcatc
601 atatgttcaa gacagagttc cttcatattc acaaggagca agaccaaaag aaaactcaat
661 gagcacttta cagttgaata catcatccac aaaccaccaa ttgccttctg aacatcagac
721 catactaagt tctagggatt ccagaaattc tttaagatca aatttttctt caagagaatc
781 agaatcttcc cgaagcaata cgcagcctgg attttcttac agttcaagta gagatgaagc
841 cccaatcata agcaattcag aaagggttgt ttcatctcaa agaccatttc aagaatcttc
901 tgacaatgaa ggtaggcgga caacgaggag attgctgtca cgcatagctt ctagcatgtc
961 atctactttt ttttcacgaa gatctagtca ggattccttg aatacaagat cattgaattc
1021 tgaaaattct tacgtttctc caagaatctt gacagcttca cagtcccgta gtaatgtacc
1081 atcagcttct gaagttcccg ataatagggc atctgaagct tctcagggat ttcgatttct
1141 taggcgaaga tggggtttgt catctcttag ccacaatcat agctctgagt cagattcaga
1201 aaattttaac caagaatctg aaggtagaaa tacaggacca tggttatctt cctcacttag
1261 aaatagatgc acacctttgt tctctagaag gaggcgagag ggaagagatg aatcttcaag
1321 gatacctacc tctgatacat catctagatc tcatattttt agaagagaat caaatgaagt
1381 ggttcacctt gaagcacaga atgatcctct tggagctgct gccaacagac cacaagcatc
1441 tgcagcatca agcagtgcca caacaggtgg ctctacatca gattcggctc aaggtggaag
1501 aaatacagga atatcaggga ttcttcctgg ttccttattc cggtttgcag tccccccagc
1561 acttgggagt aatttgaccg acaatgtcat gatcacagta gatattattc cttcaggttg
1621 gaattcagct gatggtaaaa gtgataaaac taaaagtgcg ccttcaagag atccagaaag
1681 attgcagaaa ataaaagaga gcctcctttt agaggactca gaagaagaag aaggtgactt
1741 atgtagaatt tgtcaaatgg cagctgcatc atcatctaat ttgctgatag agccatgcaa
1801 gtgcacagga agtttgcagt atgtccacca agactgtatg aaaaagtggt tacaggccaa
1861 aattaactct ggttcttcat tagaagctgt aaccacctgt gaactatgta aagagaagtt
1921 ggagcttaac ctggaggatt ttgatattca tgaactacat agagctcatg caaatgaaca
1981 agctgagtat gagtttatca gctctggtct ctacctagtg gtgttattgc acttgtgcga
2041 acaaagcttt tctgatatga tgggaaatac aaatgaacca agcacacgtg tccgatttat
2101 taaccttgca agaactcttc aggcacatat ggaagatctc gaaacttcag aggatgattc
2161 cgaagaagac ggagaccata acaggacatt tgatattgcc taacttcata taagacagat
2221 ggatgatctg tgaacataag tgtttattaa aaatggcaat taaatataaa ttacttttgt
2281 gggggaatgc ctaataaata cattgactat atataaaatg aatatataca tacacatgta
2341 tgcctgtata tatatattca ttctccagtg ttgctgaatt aaaattctgc tggacttttt
2401 aacatagcaa atccgatgtt tataaactgg taatcaaaaa ggttttttct tttaggtgag
2461 tgggaaagta ttacccttgt tttaaatatc taagcaatgc ctatcaaccc ttttttgtgt
2521 tatgattact gtagtcatat ttatgaaaaa aggtttgtgt tttactcttg ctagtgagaa
2581 aagtgggaca aaatatactt ttgaaataaa atgctatatg gcaaaaaaaa aaaaaaaaa
//