LOCUS BC065006 953 bp mRNA linear HUM 19-MAR-2007
DEFINITION Homo sapiens proteasome (prosome, macropain) 26S subunit,
non-ATPase, 8, mRNA (cDNA clone MGC:70340 IMAGE:6055235), complete
cds.
ACCESSION BC065006
VERSION BC065006.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 953)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 953)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JAN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 140 Row: e Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 39812361.
FEATURES Location/Qualifiers
source 1..953
/db_xref="H-InvDB:HIT000261710"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:70340 IMAGE:6055235"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..953
/gene="PSMD8"
/gene_synonym="HIP6"
/gene_synonym="HYPF"
/gene_synonym="Nin1p"
/gene_synonym="p31"
/gene_synonym="S14"
/db_xref="GeneID:5714"
/db_xref="HGNC:HGNC:9566"
CDS 71..844
/gene="PSMD8"
/gene_synonym="HIP6"
/gene_synonym="HYPF"
/gene_synonym="Nin1p"
/gene_synonym="p31"
/gene_synonym="S14"
/codon_start=1
/product="proteasome (prosome, macropain) 26S subunit,
non-ATPase, 8"
/protein_id="AAH65006.2"
/db_xref="GeneID:5714"
/db_xref="HGNC:HGNC:9566"
/translation="MYEQLKGEWNRKSPNLSKCGEELGRLKLVLLELNFLPTTGTKLT
KQQLILARDILEIGAQWSILRKDIPSFERYMAQLKCYYFDYKEQLPESAYMHQLLGLN
LLFLLSQNRVAEFHTELERLPAKDIQTNVYIKHPVSLEQYLMEGSYNKVFLAKGNIPA
ESYTFFIDILLDTIRDEIAGCIEKAYEKILFTEATRILFFNTPKKMTDYAKKRGWVLG
PNNYYSFASQQQKPEDTTIPSTELAKQVIEYARQLEMIV"
BASE COUNT 246 a 286 c 245 g 176 t
ORIGIN
1 cggggcggca ggcttctcga gctccgggcc cgcggcaacc tcgggcgctg ttctgcaggc
61 cgcgaccggc atgtacgagc aactcaaggg cgagtggaac cgtaaaagcc ccaatcttag
121 caagtgcggg gaagagctgg gtcgactcaa gctagttctt ctggagctca acttcttgcc
181 aaccacaggg accaagctga ccaaacagca gctaattctg gcccgtgaca tactggagat
241 cggggcccaa tggagcatcc tacgcaagga catcccctcc ttcgagcgct acatggccca
301 gctcaaatgc tactactttg attacaagga gcagctcccc gagtcagcct atatgcacca
361 gctcttgggc ctcaacctcc tcttcctgct gtcccagaac cgggtggctg agttccacac
421 ggagttggag cggctgcctg ccaaggacat acagaccaat gtctacatca agcacccagt
481 gtccctggag caatacctga tggagggcag ctacaacaaa gtgttcctgg ccaagggtaa
541 catccccgcc gagagctaca ccttcttcat tgacatcctg ctcgacacta tcagggatga
601 gatcgctggg tgcatcgaga aggcctacga gaaaatcctt ttcactgagg ccacccggat
661 cctcttcttc aacacaccca aaaagatgac agactacgcc aagaagcgag ggtgggtcct
721 gggccccaac aactactaca gttttgccag ccagcagcag aagccggaag acaccaccat
781 tccctccaca gaactggcca aacaggtcat cgagtatgcc cggcagctgg agatgatcgt
841 ctgagccccc cgggcactgg gtggggcagg gcacgagtta tttaaaacag ttacactgca
901 gggtttcgcc caataaaggt ggactgacat tccctcttaa aaaaaaaaaa aaa
//