LOCUS BC064989 2255 bp mRNA linear HUM 09-MAR-2007
DEFINITION Homo sapiens family with sequence similarity 43, member A, mRNA
(cDNA clone MGC:71447 IMAGE:5423287), complete cds.
ACCESSION BC064989
VERSION BC064989.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2255)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2255)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JAN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 50 Row: g Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 45333897.
FEATURES Location/Qualifiers
source 1..2255
/db_xref="H-InvDB:HIT000261695"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71447 IMAGE:5423287"
/tissue_type="Eye, normal, pigmented retinal epithelium"
/clone_lib="NIH_MGC_43"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2255
/gene="FAM43A"
/db_xref="GeneID:131583"
/db_xref="HGNC:HGNC:26888"
CDS 536..1807
/gene="FAM43A"
/codon_start=1
/product="family with sequence similarity 43, member A"
/protein_id="AAH64989.1"
/db_xref="GeneID:131583"
/db_xref="HGNC:HGNC:26888"
/translation="MLPWKKHKFELLAEAPPRQASKPKGYAVSLHYSALSSLARACPE
GALSRVGSMFRSKRKKLHITSEDPTYTVLYLGNATTIQARGDGCTDLAVGKIWSKSEA
GRQGTKMKLTVSAQGIRMVHAEERALRRPGHLYLLHRVTYCVADARLPKVFAWVYRHE
LKHKAVMLRCHAVLVSKPEKAQAMALLLYQTSANALAEFKRLKRRDDARHQQQELVGA
HTIPLVPLRKLLLHGPCCYKPPVERSRSAPKLGSITEDLLGEQLEQELQEEEEEEQPE
GCPEEEENRAAEGDPAEEEAEAQRALVVAMHFECGDLLDTLENGRGEALGGGGGSLGP
GAGPPPLLLGSASDMKAELSQLISDLGELSFGNDVRTLQADLRVTRLLSGDSTGSESS
IEGGGPDATSATAGDSSRQADGASADEPHSG"
BASE COUNT 373 a 752 c 727 g 403 t
ORIGIN
1 ggcacactcg ctgtagagtt tccgcgggtt ttggccccag tcctgagggt tgtgtgtgtt
61 aggggaccca cctcacgttc gccgaggagt tcctgcatat tcttgcacca tcccgggtgc
121 tgttgctggg gctctcttta tttgcacgcg cgcttctagc ttttttcctg acattttcca
181 ctctacgctc gttctttctc ccttgcattt tgttgcttgc ctgagactct ttgctctcgc
241 ccttgcccag gctggggtaa ttctgtgtgc gcgcgtgtct cccccgcacc aacctttttt
301 gcacactcga agctgaatat tttctttttt agagaattta cccgcacctc ctgcggggtt
361 cctaagcact ctctctgctc ccctcccccc aactccctac cacagggccg ctcccagtag
421 ttttattctt cgatcttgcc cgggccgagc ctggcagggg ccggtggctc agcgggcctc
481 gcacccggcg ctccgccgcc gccgccgccc agctgcgccg gggcgccctc cggagatgct
541 gccgtggaag aagcacaagt tcgagctgct ggccgaggcg ccgccgcggc aggcgtccaa
601 gcccaagggc tacgctgtga gcctgcacta ctcggcgctc agctcgctgg cgcgggcgtg
661 ccccgaaggc gcgcttagcc gggtgggcag catgttccgc tccaagcgca agaagctgca
721 catcactagc gaggacccaa cttacaccgt gctctacctg ggcaatgcca ccaccatcca
781 ggcgcgcggc gacggctgca ccgaccttgc tgtgggcaag atctggagca agagcgaggc
841 gggccgtcag ggcaccaaga tgaagctgac ggtgagtgcg cagggtatcc gcatggtgca
901 cgccgaggag cgcgcgctgc gccgcccggg ccacctctac ctgctgcacc gcgtcaccta
961 ctgcgtggcc gacgcgcggc tgcccaaggt cttcgcctgg gtgtaccggc acgagctgaa
1021 gcacaaggcc gtgatgctgc gctgccacgc cgtgctggtg tccaagcccg aaaaggcgca
1081 ggccatggcc ctgctgctct accagacgtc ggccaacgcg ctggcggaat ttaaacgcct
1141 caagcggcgg gacgacgcgc gtcaccagca gcaggagctg gtgggcgcac acaccatccc
1201 gctagtgccg ctgcgcaagc tgctcctaca cggaccctgc tgctataaac cgccggtgga
1261 gcgcagccgc agcgcgccca agcttggctc catcaccgag gacctgctcg gcgaacagct
1321 ggagcaggag ctgcaggagg aagaggaaga ggagcaaccc gagggctgcc cggaggagga
1381 ggagaaccgt gcggcagagg gagatccagc agaggaggag gccgaggcgc agcgtgcgct
1441 agtggtcgcc atgcactttg agtgcgggga cttgttggat actctggaga atggccgtgg
1501 ggaggcgcta ggaggcggcg ggggctccct gggcccgggg gccgggccgc cgcctctgct
1561 gctgggcagc gcctccgaca tgaaggctga gctgtcgcaa cttattagcg acctgggcga
1621 gctcagcttc ggcaacgacg tgcgcaccct gcaggccgac ttgcgggtga cgcgcctgct
1681 gtcaggcgac agcacgggca gcgagagctc catcgagggc gggggccctg acgccacctc
1741 cgccaccgcc ggggactcgt cccgccaggc cgacggcgcc agtgcagacg agccccactc
1801 gggctgagct cctccgcgcg tcgccggcgc tccaccgtgg ctacccatcc gtggtcccga
1861 caacctccct gtcccttgcc cgcccccagg aagggggaaa tggggcattt ggggcccaga
1921 cctacacttg gagcccaggt ccagcgttcc cccgaccgct ttcccctacc tcccggcccc
1981 cgctcccgcc ccagcacttt tggctctgtt gcgcgtgggg atgcggggag atttgagagg
2041 ggaaaacccc gccaggaggg agagagaggc acccctctgg gatgcgggtg agggaaggtt
2101 ggctgaagtt cctagtctca ggccgtaggt gcctggccag tttcctgttt gtggggcagc
2161 tggggcctga ggaggagggg ttcacttcct cctcccaccc cctgggagcg gccctgcgct
2221 gtcactgaca tctcattaaa aaaaaaaaaa aaaaa
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