LOCUS BC064984 1009 bp mRNA linear HUM 03-JAN-2005
DEFINITION Homo sapiens additional sex combs like 1 (Drosophila), mRNA (cDNA
clone IMAGE:2964718), complete cds.
ACCESSION BC064984
VERSION BC064984.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1009)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1009)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (02-JAN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 50 Row: a Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 29570781
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1009
/db_xref="H-InvDB:HIT000261691"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:2964718"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1009
/gene="ASXL1"
/gene_synonym="KIAA0978"
/db_xref="GeneID:171023"
CDS 418..672
/gene="ASXL1"
/gene_synonym="KIAA0978"
/codon_start=1
/product="ASXL1 protein"
/protein_id="AAH64984.1"
/db_xref="GeneID:171023"
/translation="MKDKQKKKKERTWAEAARLVLENYSDAPMTPKQILQVIEAEGLK
EMSGTSPLACLNAMLHSNSRGGEGLFYKLPGRISLFTLKR"
BASE COUNT 226 a 336 c 287 g 160 t
ORIGIN
1 cacgcacgca cccgggcgcc gaagggaaag ccgcgtctcg ccctcccgcc ccgccgtcgg
61 tcctgtctca gtccctcagc agagcgggaa agcggaggcc ggagccgtga cctctgaccc
121 cgtggttatg cggagccgcc gcattcctta gcgatcgcgg ggcagccgcc gctgccgccg
181 tgggcgactg acgcagcgcg ggcgcgtgga gccgccgccg cccctccccc accgccgctc
241 tcgcgccagc cggtccccgc gtgcccgccc cttctccccg gccgcacccg agacctcgcg
301 cgccgccgct gccacgcgcc ccccccaccg ccgccgccgc cccagccccg cgccaccgcc
361 ccagcccgcc cagcccggag gtcccgcgtg gagctgccgc cgccgccggg gagaaggatg
421 aaggacaaac agaagaagaa gaaggagcgc acgtgggccg aggccgcgcg cctggtatta
481 gaaaactact cggatgctcc aatgacacca aaacagattc tgcaggtcat agaggcagaa
541 ggactaaagg aaatgagtgg gacttcccct ctcgcatgcc tcaatgctat gctacattcc
601 aattcaagag gaggagaggg gttgttttat aaactgcctg gccgaatcag ccttttcacg
661 ctcaagagat gaagtcttgc tatgttggtt aaactggtct cgaactcctg gcctcaggtg
721 atcttcccac cacagcttca caaagcactg ggatggatta cagaaggatg ccctgcagtg
781 gtctcgccat ccagctacag tggagggaga ggagccagag gacacggctg atgtggagag
841 ctgtgggtct aatgaagcca gcactgtgag tggtgaaaac gatgtatctc ttgatgaaac
901 atcttcgaac gcatcctgtt ctacagaatc tcagagtcga cctctttcca atcccaggga
961 cagctacaga gcttcctcac aggcgaacaa aaaaaaaaaa aaaaaaaaa
//