LOCUS BC064973 1555 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens chromosome 20 open reading frame 111, mRNA (cDNA clone
MGC:74539 IMAGE:6151501), complete cds.
ACCESSION BC064973
VERSION BC064973.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1555)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1555)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JAN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 140 Row: k Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 23346408.
FEATURES Location/Qualifiers
source 1..1555
/db_xref="H-InvDB:HIT000261680"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:74539 IMAGE:6151501"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1555
/gene="C20orf111"
/gene_synonym="dJ1183I21.1"
/gene_synonym="HSPC207"
/db_xref="GeneID:51526"
/db_xref="HGNC:HGNC:16105"
CDS 103..981
/gene="C20orf111"
/gene_synonym="dJ1183I21.1"
/gene_synonym="HSPC207"
/codon_start=1
/product="chromosome 20 open reading frame 111"
/protein_id="AAH64973.1"
/db_xref="GeneID:51526"
/db_xref="HGNC:HGNC:16105"
/translation="MKSEAKDGEEESLQTAFKKLRVDASGSVASLSVGEGTGVRAPVR
TATDDTKPKTTCASKDSWHGSTRKSSRGAVRTQRRRRSKSPVLHPPKFIHCSTIASSS
SSQLKHKSQTDSPDGSSGLGISSPKEFSAGESSTSLDANHTGAVVEPLRTSVPRLPSE
SKKEDSSDATQVPQASLKASDLSDFQSVSKLNQGKPCTCIGKECQCKRWHDMEVYSFS
GLQSVPPLAPERRSTLEDYSQSLHARTLSGSPRSCSEQARVFVDDVTIEDLSGYMEYY
LYIPKKMSHMAEMMYT"
BASE COUNT 468 a 342 c 343 g 402 t
ORIGIN
1 gttgggagag acgctctgaa ctgactgccc cgcatcaccg gagcgtccca gctgcgagga
61 gtgtaaacag gaacatcgat aagtagtgta aaaacttgca caatgaaatc cgaagccaag
121 gatggagagg aggagagtct acagactgct ttcaaaaaat taagagtgga tgcatcaggg
181 tctgtagcat ctctgtctgt tggagaaggc acaggtgtca gagcaccagt cagaacagca
241 acagatgata ccaaacctaa aaccacatgt gcatctaaag acagttggca cgggtctaca
301 aggaagtctt cacgaggagc agtgagaact cagcgtcgtc gacgttctaa gtctcctgtc
361 cttcatcctc caaagtttat acattgcagt acaatagcgt cttcttccag cagtcaactc
421 aagcacaaaa gccagactga ctcacctgat ggcagcagtg ggctgggaat ttcatcccct
481 aaagagttca gtgcaggaga aagctctact tctctcgatg ctaatcacac aggggcagtc
541 gttgagcctt tgagaacttc tgttccaagg ctcccatcag agagtaagaa ggaagactcc
601 tctgacgcta cccaagtccc ccaagcaagt ctcaaagcca gtgatctctc tgactttcaa
661 tcagtttcca agctaaacca gggcaagcca tgcacatgca taggcaagga atgccagtgt
721 aagagatggc atgatatgga agtgtattcc ttttcaggcc tgcagagtgt ccctcccttg
781 gctccagaac gaagatccac acttgaggac tactctcagt cgctgcacgc cagaactctg
841 tctggctctc cccgatcctg ttctgagcaa gctcgagtct tcgtggatga tgtgaccatt
901 gaggacctgt caggctacat ggagtattac ttgtatattc ccaagaaaat gtcccacatg
961 gcagaaatga tgtacacctg atagcaagaa gctaattcat atgctttaaa ccaatgaagg
1021 cttgtcaaag agatttagtt aatggcagac cttgtggcca ctttgtgtga gaagacatct
1081 ctttctgctc actgtgcttg caataaaaac ttttcttggc atctcagtta atcttcattc
1141 tttcaactta ctctcttgag ttcttacata cacttcaagg cgagcagatc aaagaaaaat
1201 cccccttatt tagaaatgtt cctgggggat gaagaaacca taattacttg agactggcag
1261 cagtgggtat atggtaaaag cctttgtaaa acagtgcatt tttcagattt gtttaaggtt
1321 tgctagccaa ggaaagtaaa atgtgatttt gtaactgcac taaacatttg tcatgctgtg
1381 gttgccagcc cagaatatta gaagttacaa gactgattta aaccgtctct gatttaatgc
1441 aagatatatt gtgtctataa aggtttctct tgttattgtt aagccagaga tctaaggttt
1501 agattcaatt tgaataaact agctggcctg ccaaaaaaaa aaaaaaaaaa aaaaa
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