LOCUS BC064945 1717 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens golgin, RAB6-interacting, mRNA (cDNA clone MGC:70512
IMAGE:6019822), complete cds.
ACCESSION BC064945
VERSION BC064945.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1717)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1717)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JAN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 140 Row: c Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22748638.
FEATURES Location/Qualifiers
source 1..1717
/db_xref="H-InvDB:HIT000261652"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:70512 IMAGE:6019822"
/tissue_type="Pancreas, epithelioid carcinoma"
/clone_lib="NIH_MGC_70"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1717
/gene="GORAB"
/gene_synonym="GO"
/gene_synonym="NTKL-BP1"
/gene_synonym="NTKLBP1"
/gene_synonym="RP11-545I10.1"
/db_xref="GeneID:92344"
/db_xref="HGNC:HGNC:25676"
/db_xref="MIM:607983"
CDS 19..759
/gene="GORAB"
/gene_synonym="GO"
/gene_synonym="NTKL-BP1"
/gene_synonym="NTKLBP1"
/gene_synonym="RP11-545I10.1"
/codon_start=1
/product="GORAB protein"
/protein_id="AAH64945.1"
/db_xref="GeneID:92344"
/db_xref="HGNC:HGNC:25676"
/db_xref="MIM:607983"
/translation="MSWAAVLAVAAARFGHFWGCRWPGPMAQGWAGFSEEELRRLKQT
KDPFEPQRRLPAKKSRQQLQREKALVEQSQKLGLQDGSTSLLPEQLLSAPKQRVNVQK
PPFSSPTLPSHFTLTSPVGDGQPQGIESQPKELGLENSHDGHNNVEILPPKPDCKLEK
KKVELQEKSRWEVLQQEQRLMEEKNKRKKALLAKAIAERSKRTQAETMKLKRIQKELQ
ALDDMVSADIGILRNRIDQASLDYSYAR"
BASE COUNT 525 a 329 c 350 g 513 t
ORIGIN
1 ggccggggaa aaacccggat gagctgggca gcagtgttgg cagtcgcggc tgcgagattt
61 gggcactttt gggggtgccg gtggcccggg ccgatggcgc aaggttgggc aggcttctct
121 gaggaggaac tgaggagact aaagcagact aaagatccat ttgaaccaca gcgacgtctc
181 cccgcgaaga aaagtcgaca acaacttcag cgagaaaaag cccttgtaga gcaaagccaa
241 aaacttgggc ttcaagatgg atcaacctca ttacttccag agcagctgct ttcagcacca
301 aaacagagag ttaacgttca aaaaccacct ttttcttccc ctactcttcc gagtcatttc
361 actctcacct cccccgttgg tgatggacaa ccacagggca ttgaaagtca gccaaaggaa
421 ctgggacttg agaattccca tgatggtcac aacaatgttg agattctacc tccaaagcca
481 gattgcaaat tggagaaaaa gaaagtggaa ttgcaagaaa aatctcgttg ggaagtcctc
541 caacaagaac aacggctaat ggaagagaaa aataaacgta aaaaagctct tttggctaaa
601 gctattgcag aaagatctaa aagaactcag gcagagacca tgaaactaaa gcggatccag
661 aaggagttgc aggctttaga tgacatggtg tcagctgaca ttggaattct caggaaccgg
721 attgatcagg ccagcttaga ctattcatac gctcggtgag ttggggaaat tgaatctgaa
781 caaggagtat gatttaatta atgtttattg ccagctgttc caggggcttt tatgtatatc
841 atcattgaag cctcaaaaca accccattca gtgctgtatt tattcttctt ttgtgctaat
901 tcaagtgtct cctcttcagt gaagtcttcc ttaactctgc cctactagtt aaccttgttc
961 gtgtgccatt agagcagttc ttgcattatt tatttacgtt ttagtctttg ctgcgaaacc
1021 ctcagctatt taatgtttgg aagtgttttt gctcatcttt cagcatctag caaagtaaat
1081 atctgagtgg tttcgccaaa actgttactc tgacaccaag tctgtgttct ttccattaaa
1141 atttttgata tctgatatag tcctatagga ttgaagtcta gtcctcactt tagctttcat
1201 cagagtaaga ggatctagtt tagtttttaa aagcttatga atattttaag catatcctct
1261 gtcttggaaa tttgaaatat tttctctttt tttttccttt caattatact ctgtatgaaa
1321 tggtttaata tatgtttcct tggtttcaac cattggcatt ttttaaaaga gaaaaaatac
1381 catggagtat ttttaaaatg aactaacaca tgtaatgaat tacatggact ttgcagacag
1441 ataaaagggc aaaaaaatat gtccaatttc agggttttca gccctttcaa cattgcttta
1501 atcatcctgg tttgtctttt ttcacaaggg aatgctgtgt taatgactca gttttctatc
1561 ttactctgtt acactagaaa tgaatcagaa tgcctcatta ggccagggta aaccacaaca
1621 tcagaatgtt tatataacaa tttattaaag cggaaatgct tgattgtggt ttttaataaa
1681 ctgttgagtg tttaagaaaa aaaaaaaaaa aaaaaaa
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