LOCUS BC064900 3223 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromobox homolog 6, mRNA (cDNA clone MGC:74950
IMAGE:6009294), complete cds.
ACCESSION BC064900
VERSION BC064900.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3223)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3223)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JAN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 140 Row: a Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 46852391.
FEATURES Location/Qualifiers
source 1..3223
/db_xref="H-InvDB:HIT000261610"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:74950 IMAGE:6009294"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_68"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3223
/gene="CBX6"
/db_xref="GeneID:23466"
/db_xref="HGNC:HGNC:1556"
CDS 12..1250
/gene="CBX6"
/codon_start=1
/product="chromobox homolog 6"
/protein_id="AAH64900.1"
/db_xref="GeneID:23466"
/db_xref="HGNC:HGNC:1556"
/translation="MELSAVGERVFAAESIIKRRIRKGRIEYLVKWKGWAIKYSTWEP
EENILDSRLIAAFEQKERERELYGPKKRGPKPKTFLLKARAQAEALRISDVHFSVKPS
ASASSPKLHSSAAVHRLKKDIRRCHRMSRRPLPRPDPQGGSPGLRPPISPFSETVRII
NRKVKPREPKRNRIILNLKVIDKGAGGGGAGQGAGALARPKVPSRNRVIGKSKKFSES
VLRTQIRHMKFGAFALYKPPPAPLVAPSPGKAEASAPGPGLLLAAPAAPYDARSSGSS
GCPSPTPQSSDPDDTPPKLLPETVSPSAPSWREPEVLDLSLPPESAATSKRAPPEVTA
AAGPAPPTAPEPAGASSEPEAGDWRPEMSPCSNVVVTDVTSNLLTVTIKEFCNPEDFE
KVAAGVAGAAGGGGSIGASK"
BASE COUNT 561 a 1072 c 973 g 617 t
ORIGIN
1 cgctgagcaa gatggagctg tctgcagtgg gcgagcgggt cttcgcggcc gaatccatca
61 tcaaacggcg gatccgaaag ggacgcatcg agtacctggt gaaatggaag gggtgggcga
121 tcaagtacag cacttgggag cccgaggaga acatcctgga ctcgcggctc attgcagcct
181 tcgaacaaaa ggagagggag cgtgagctgt atgggcccaa gaagagggga cccaaaccca
241 aaactttcct cctgaaggcg cgggcccagg ccgaggccct ccgcatcagt gatgtgcatt
301 tctctgtcaa gccgagcgcc agtgcctcct cgcccaagct gcactccagc gcagccgtgc
361 accggctcaa gaaggacatc cgccgctgcc accgtatgtc ccgccgtccc ctgccccgcc
421 cggacccgca ggggggcagc cccggactgc gcccgcccat ttcgcccttc tcggagacgg
481 tgcgcatcat caaccgcaag gtgaagccgc gggagcccaa gcggaaccgc atcatcctga
541 acctgaaggt gatcgacaag ggcgctggcg gcgggggcgc cgggcagggg gccggggcgc
601 tggcccgccc caaagtcccc tcgcggaacc gcgttatagg caagagcaag aagttcagcg
661 agagcgtcct gcgtacacag atccgccaca tgaagttcgg cgcctttgcg ctgtacaagc
721 ctccgcccgc ccccctggta gccccgtccc ccggcaaggc tgaggcctca gccccgggcc
781 ctgggctact tctggccgcc cccgccgccc cctacgacgc ccgcagctct ggctcctccg
841 gctgcccctc gcctacacca cagtcctctg accccgacga cacgcccccc aagctcctcc
901 ccgagaccgt gagcccatcc gcccccagct ggcgcgagcc ggaggtgctc gacctgtccc
961 tccctcccga gtcggcagcc accagcaagc gggcaccgcc tgaggtcaca gctgctgccg
1021 gcccggcacc tcccacggcc cctgagcccg ccggtgcctc ctccgagccc gaggctgggg
1081 actggcgccc cgagatgtca ccctgctcca atgtggtcgt caccgatgtc accagcaacc
1141 tcctgacggt cacaatcaag gaattctgca accctgagga tttcgagaag gtggctgctg
1201 gggtagcagg cgccgctggg ggcggtggca gcattggggc gagcaagtga gggggctcca
1261 ccaaggaggg gggcttgggg gggccctcct gcccgaagtc atactcttgc tcccacccca
1321 cccttgcccc cagccctctc tccctgtgct ttgcttgtct caaatggctc ggtgttgacc
1381 cagggatggg gctgggtagt tggggtccca gaaagccggg ggtaggggcc accctggaat
1441 ggggcagggg aagggcacac cccctgccca tgcatggtag cccactgggt ggtttctgga
1501 aagccctaga aactagggtt cctctgcccc ttccacatcc cacctgtctc tctagcttgc
1561 ttcctgctct cctgtgcggc gtctgatttc tcggtgctaa cctggcagct gtggggccct
1621 taggagcccc ccaccgaggg tggacacagt ccctttcctt cctgcagatg cctaggcagg
1681 aggagggctt cctgcctgtt tggcaaagtc ccaggcagag gccaaggatg aggcctgact
1741 cggctcctcc ctccacatca gccagggcat cagaagttgg gccagggcgg ggtcttccct
1801 gctcgatttt ggacgaggcc taagtagacc ccctatgccc tgccccagcc ctggctcttt
1861 cctaaccccc tcaacggtgg gaggaactgg cagagggtgc gcctggccac agcctccccg
1921 catctaaagg ccccttcagt tcttgaccaa aggtgctacg agaacctgcc gtggaaactt
1981 ccagttgtgc gtctgcccca ctcgctgtgt ttgtccgtgg gttcatacat gcattgggtg
2041 ctaggcccca ggctgccggg tggcaccctt tacagttcct ttgaacaggg gcattgaagg
2101 cctggactgc ctctcgcctc agtaggcctg gggaccaggc ttgggtctgg aggtttgctg
2161 tggaagtcac caggcctccc ctcctggccc aggtgtgctg ggggcaccgt gccccccacc
2221 cccctgccct cctcagggtg gtcagcccaa cctgtcggac cttcacttca catcatggtg
2281 gggaccgaga tagagaggga gaccccattc caagctccct cttcctcccg gtgtttgggg
2341 aggatgctga agaatccatt cccgagggcc tcccggcttg tcccagcccc tcttttgctt
2401 ctgaccacgg aggctttctc acagcccagc ctgcctgaag caaaggaggc tcccgtgtcc
2461 tgggcagctt ctgtttccct ctgctgcctg ggagctgagg cacccgtgcc agtggcagag
2521 gccacagccc cagccttagg ccaggccctg ggagggcagg caggcaaagg ggagaccaga
2581 gggtctgtgt tctccaggag aatgagggtg ttggtcccag aattgggacc ggggccccgc
2641 tggccagccc tgggccactt cccgggtctc cattgtgcgt gggtggcgtg ttccaggcgt
2701 ggctggagct ggcttcctgg ctgtgctgcc atgggcccct ccctcagaag cacgttggca
2761 ggaggccgat cagaacccta gcgcctttgg tcctaagaat gggaggctgc cttccttccc
2821 aatctccctg ccagggccca cagcgtggcc ctagccctcc cctccccggg atgtagaacg
2881 gggaccctcg cagggttggg gcgggggctg atactcctcg gcccctccct accctgccct
2941 gtgtgttggc tttgtggccg tccaagtgcc aattggcttt tcgcccaaat aagggctggt
3001 atttctcctc tgtccttgga ggtgatttcc ccctgacccc ctcccccagg tgagtgacca
3061 cctgggtgcc agttacaggt gtttccagag accatagaaa tgtgttttcc tgagagttcg
3121 tgtcattcgt gacttttttg taaagaagtt gtgttttcag aggtgatttt atgacaggaa
3181 agtgaaagaa ttagttttgc aaaaaaacaa aaaaaaaaaa aaa
//