LOCUS BC064849 2700 bp mRNA linear HUM 25-MAR-2004
DEFINITION Homo sapiens chromosome 9 open reading frame 93, mRNA (cDNA clone
IMAGE:30389190), partial cds.
ACCESSION BC064849
VERSION BC064849.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2700)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2700)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (02-JAN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Michael Brownstein
cDNA Library Preparation: Invitrogen Corp
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield,
Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin,
Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu,
Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska,
Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie
Schein, Asim Siddiqui, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 141 Row: o Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, Similarity but not identity to protein.
FEATURES Location/Qualifiers
source 1..2700
/db_xref="H-InvDB:HIT000261606"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:30389190"
/tissue_type="Testis"
/clone_lib="NIH_MGC_180"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6.1"
gene <1..2700
/gene="C9orf93"
/gene_synonym="bA778P13.1"
/gene_synonym="FLJ39267"
/gene_synonym="FLJ46740"
/db_xref="GeneID:203238"
CDS <1..2502
/gene="C9orf93"
/gene_synonym="bA778P13.1"
/gene_synonym="FLJ39267"
/gene_synonym="FLJ46740"
/codon_start=1
/product="C9orf93 protein"
/protein_id="AAH64849.1"
/db_xref="GeneID:203238"
/translation="KNIKELQDKLADVNKELSHLHTKCADREALISTLKVELQNVLHC
WEKEKAQAAQSESELQKLSQAFHKDAEEKLTFLHTLYQHLVAGCVLIKQPEGMLDKFS
WSELCAVLQENVDALIADLNRANEKIRHLEYICKNKSDTMRELQQTQEDTFTKVAEQI
KAQESCWHRQKKELELQYSELFLEVQKRAQKFQEIAEKNMEKLNHIEKSHEQLVLENS
HFKKLLSQTQREQMSLLAACALMAGALYPLYSRSCALSTQRDFLQEQVNTFELFKLEI
RTLAQALSTVEEKKQEEAKMKKKTFKGLIRIFRKGVIAVLAANRLKILGQSCASLFTW
MESFKEGIGMLVCTGEPQDKHKFPKHQKEQLRCLQALSWLTSSDLLAAIISSMAELQD
VIGKADPNSRICGHLLIGAAKNSFAKLMDKISLVMECIPLHSSRSITYVEKDSLVQRL
AHGLHKVNTLALKYGLRGHVPITKSTASLQKQILGFTQRLHAAEVERRSLRLEVTEFK
RSVNEMKKELDKAQGLQMQLNEFKQSKLITHEKFESACEELNNALLREEQAQMLLNEQ
AQQLQELNYRLELHSSEEADKNQTLGEAVKSLSEAKMELRRKDQSLRQLNRHLTQLEQ
DKRRLEENIHDAESALRMAAKDKECVANHMRAVENTLHKVRDQISLSWSAASRNDFTL
QLPKLHLETFAMEGLKGGPEVVACQAMIKSFMDVYQLASTRIMTLEKEMTSHRSHIAA
LKSELHTACLRENASLQSIGSRDHSNLSIPSRAPLPADTTGIGDFLPLKAELDTTYTF
LKETFINTVPHALTSSHSSPVTMSANANRPTQIGL"
BASE COUNT 989 a 518 c 578 g 615 t
ORIGIN
1 aaaaatataa aggaacttca ggataaactg gctgatgtta ataaagagtt aagtcattta
61 cacactaaat gtgcagaccg agaggcttta ataagcactt taaaagtgga actacaaaat
121 gtgctgcact gttgggagaa agaaaaggct caggcagccc agtctgaaag tgaactgcag
181 aagctttccc aggctttcca taaggatgca gaggagaagc taaccttcct tcacacctta
241 tatcagcact tggtagcagg ctgtgtgctc ataaaacaac cagaaggcat gctggataaa
301 ttctcttggt ctgagctttg tgcagtctta caggagaatg ttgatgccct gattgcagac
361 ctcaacaggg ctaatgagaa gataaggcat ctagagtata tctgtaaaaa caagtctgac
421 acgatgagag agcttcagca gactcaggaa gacaccttta ccaaagtggc agaacagatc
481 aaagcccaag agagctgctg gcacagacaa aagaaggaac tagagctgca gtattctgaa
541 ctcttcctgg aggtgcagaa gagggcacag aaatttcaag aaattgctga aaaaaacatg
601 gaaaaattga accatattga gaagtcacat gaacagttgg ttcttgaaaa ttcgcacttc
661 aaaaaactgt tatcacagac tcaaagggaa cagatgtcct tgctggcagc ctgtgcatta
721 atggctggtg ccttatatcc cctctatagc cgatcatgcg ccttgtctac acagagagat
781 tttctccagg agcaggtcaa cacctttgag ttgttcaaac tggaaattag aactctagcc
841 caggctttgt caactgtaga ggaaaagaag caagaggaag ccaagatgaa aaagaaaaca
901 ttcaaaggat tgatacgtat atttcggaaa ggtgttattg ctgttttggc agcaaacaga
961 ctcaagattt tgggccaatc atgtgcctct ctttttacct ggatggagag tttcaaagaa
1021 ggcataggca tgttagtgtg cacaggagag ccccaagaca agcataaatt tccaaaacat
1081 caaaaggagc agttgcgttg tttacaagcg ctcagttggc tcaccagttc tgaccttctt
1141 gctgcaataa tcagttctat ggctgaatta caagacgtca ttggtaaagc agatccaaat
1201 tccagaattt gtggacattt actcataggt gcagccaaga attcttttgc aaaactcatg
1261 gataaaatta gtctggtaat ggaatgtata cctctgcaca gtagcaggag tattacatat
1321 gtagaaaaag attccctggt tcagaggctg gcccatggac ttcataaagt aaacacactg
1381 gccctgaaat atggtttgcg tggccatgtg cccattacga aaagcacagc atcgttgcag
1441 aagcaaatac ttggatttac acaaagactg catgctgcag aagtggagcg ccgctcacta
1501 cgcttagagg tcacagaatt caaacgaagt gtgaatgaaa tgaaaaagga gcttgacaaa
1561 gcccagggtc tgcaaatgca attaaatgaa tttaagcagt ctaaattgat cacccatgag
1621 aagtttgaaa gtgcatgtga agaactaaat aatgcattac ttcgggaaga gcaggcacaa
1681 atgctattga atgaacaggc acaacaacta caggaattga attatagact tgaattgcac
1741 tccagtgagg aagctgacaa aaaccaaact cttggagaag ctgttaagag tctctccgag
1801 gcaaagatgg agctgagaag aaaagatcaa tctctgcgtc agctcaatag acatcttacc
1861 cagctggagc aggacaagcg tcgactggag gagaacatcc atgatgcaga gagtgccctc
1921 cgcatggcag ccaaagacaa agaatgtgtt gctaatcaca tgagagcagt agaaaatacg
1981 cttcacaagg tcagagatca gatctcgctg tcatggtctg cggcaagtag gaatgacttc
2041 accctacagc tacccaaact gcacctggag acctttgcaa tggaggggct caagggcggg
2101 ccagaggtgg tagcatgcca ggctatgatt aaaagtttca tggatgtcta ccagcttgca
2161 agcactagaa tcatgacatt agagaaggaa atgacatctc atcgaagtca cattgcagcc
2221 ttgaaatcag aacttcacac agcttgttta cgtgaaaatg caagtttaca atcaatagga
2281 tcacgagacc attcaaatct ctccattcct tcaagagctc ctcttcctgc tgacacaact
2341 ggtattgggg atttcttacc attgaaagct gaacttgata ctacttacac tttcttaaag
2401 gagacattta taaatactgt gccccatgct ctgacatcat ctcactcctc tccagtgact
2461 atgtctgcta atgccaacag accaactcag attggattat gacttcatga aattaaaaaa
2521 tggaggaaga gttaacagta caattaaaat tgttttgaat gggaaaaaaa aaaaaaaaaa
2581 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2641 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//