LOCUS BC064698 4932 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens transcription factor CP2-like 1, mRNA (cDNA clone
MGC:71670 IMAGE:30347863), complete cds.
ACCESSION BC064698
VERSION BC064698.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4932)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4932)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Stefan Hansson
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 133 Row: j Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7657298.
FEATURES Location/Qualifiers
source 1..4932
/db_xref="H-InvDB:HIT000261577"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71670 IMAGE:30347863"
/tissue_type="Placenta, normal"
/clone_lib="NIH_MGC_147"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..4932
/gene="TFCP2L1"
/gene_synonym="CRTR1"
/gene_synonym="LBP-9"
/gene_synonym="LBP9"
/db_xref="GeneID:29842"
/db_xref="HGNC:HGNC:17925"
/db_xref="MIM:609785"
CDS 94..1533
/gene="TFCP2L1"
/gene_synonym="CRTR1"
/gene_synonym="LBP-9"
/gene_synonym="LBP9"
/codon_start=1
/product="transcription factor CP2-like 1"
/protein_id="AAH64698.1"
/db_xref="GeneID:29842"
/db_xref="HGNC:HGNC:17925"
/db_xref="MIM:609785"
/translation="MLFWHTQPEHYNQHNSGSYLRDVLALPIFKQEEPQLSPENEARL
PPLQYVLCAATSPAVKLHEETLTYLNQGQSYEIRLLENRKLGDFQDLNTKYVKSIIRV
VFHDRRLQYTEHQQLEGWRWSRPGDRILDIDIPLSVGILDPRASPTQLNAVEFLWDPA
KRASAFIQVHCISTEFTPRKHGGEKGVPFRVQIDTFKQNENGEYTEHLHSASCQIKVF
KPKGADRKQKTDREKMEKRTAQEKEKYQPSYETTILTECSPWPDVAYQVNSAPSPSYN
GSPNSFGLGEGNASPTHPVEALPVGSDHLLPSASIQDAQQWLHRNRFSQFCRLFASFS
GADLLKMSRDDLVQICGPADGIRLFNAIKGRNVRPKMTIYVCQELEQNRVPLQQKRDG
SGDSNLSVYHAIFLEELTTLELIEKIANLYSISPQHIHRVYRQGPTGIHVVVSNEMVQ
NFQDESCFVLSTIKAESNDGYHIILKCGL"
BASE COUNT 1142 a 1206 c 1155 g 1429 t
ORIGIN
1 ggtttcggag cgcgaagcca ccgctgggtc ctcggcgcgc cccgcgtctg cgcttgctgc
61 cgcgccccgg tcggcgcgct gggagttcca gccatgctct tctggcacac gcagcccgag
121 cactacaacc agcacaactc cggcagctac ctgcgtgatg tgctcgctct gcccatcttc
181 aagcaggagg aaccccagct gtcccccgag aacgaggccc gcctgccacc cctgcaatat
241 gtgttgtgtg ctgccacgtc cccagccgtg aagctgcatg aagagacgct gacctacctc
301 aaccaaggtc agtcttatga aatccgacta ctggagaatc ggaagctggg agactttcaa
361 gatctgaaca caaaatatgt caagagcatc atccgtgtgg tcttccatga ccgccggctg
421 cagtatacgg agcaccagca gctggagggc tggcggtgga gtcggccagg ggaccggatc
481 ctggacatcg atattccact gtctgttggt atcttggacc ccagggccag cccgacccag
541 ctgaatgcag tcgagttttt gtgggaccct gcgaagagag cttctgcatt cattcaggta
601 cactgcatca gcacagaatt cacccccagg aagcacgggg gcgagaaggg agtgcccttt
661 cgagtccaga ttgacacgtt taagcagaac gagaatgggg agtacacgga gcacctgcac
721 tcagccagct gccagatcaa ggtgttcaag ccgaagggag ccgatcggaa acagaagact
781 gaccgggaga agatggagaa aagaactgcc caagagaagg agaaatacca gccgtcctat
841 gaaaccacca tcctcacaga gtgctctcca tggcccgacg tggcctacca ggtgaacagc
901 gccccgtccc caagctacaa tggttctcca aacagctttg gcctcggcga aggcaacgcc
961 tctccgaccc acccggtgga ggccctgccc gtgggcagtg accacctgct cccatcagct
1021 tcgatccagg atgcccagca gtggcttcac cgcaacaggt tctcgcagtt ctgccggctc
1081 tttgccagct tctcaggtgc tgacttgctg aagatgtccc gagatgattt ggtccagatc
1141 tgtggtcccg cagatgggat ccggctcttc aacgccatca aaggccggaa tgtgaggcca
1201 aagatgacca tttatgtctg tcaggagctg gagcagaatc gagtgcccct gcagcagaag
1261 cgggacggca gtggagacag caacctgtct gtgtaccacg ccatcttcct ggaagagctg
1321 accaccttgg agctgattga gaagatcgcc aacctgtaca gcatctcccc ccagcacatc
1381 caccgagtct accggcaggg ccccacgggc atccatgtgg tggtgagcaa cgagatggtg
1441 cagaacttcc aagatgaatc ctgttttgtc ctcagcacaa ttaaagctga gagcaatgat
1501 ggctaccaca tcatcctgaa atgtggactc tgagcagcag tggacctcat acctgtctcc
1561 agctcccagc cctgtggatc cccgtggatg tagacattgc cccactgtaa gctgtggcct
1621 caccaggcaa gctgaggcca ggagggaccc tgcccagtct gtgaaagcta cagagcacca
1681 accagcagaa gcctgtggac accaagtacg gtgtacagaa agccagtggc tcctttctcc
1741 cttcctcttg gcctccagat tttgaatggt tccttgttct tttctattgg tccaaccctg
1801 acgttctaaa agggcaaaca gtggagacgt ctgctctgaa atccctcatc ccttagttgg
1861 aagctgattg ggtatcttgg tgctgcctgt attggtccct tctgaccact ctcctgcctc
1921 cagagaaagc tctgcttcac cctggaagct ggtaccttta cctcctcctc tgggagttgg
1981 ctgcatggcc agcactgccg acttgatggg agcagtttgc cctcattctc ctgtttcagg
2041 tttgcttccc ttctcagtga ccctggtgag catccgcctt tcctgttctt ggatgaattg
2101 atgggagtgg ggctattctg tgccttctac ctctttcttc tctacgttgt ttctaaggat
2161 ctgctgctgc ggaacccaaa gatgtgctcc tgtctctgca ctggcgcatt ggcatggtag
2221 atgccacaat gtatgtgcac ggcctttctc agagacatta gttctgaggc cctttgtggg
2281 gaggttaggg ggatggtaat agaaaaagac tattttattt cctggcaatc acgggtaagg
2341 aggattagga atgagtattc cattcctagg tgtcatcaga tgaccttgac caccacaata
2401 ccaggccctc ttggatggac ttatagaaag ttagagaaga ccttgttgaa ccgctgctaa
2461 acttgccaca ggagcgatgt gttttctctg agtgcccctc acttacatgt ttatctttgt
2521 ttgtagaggc tatgtttagg atattttgcc tgcatcagaa tgggtgcatc atctttctta
2581 atggcctaac tatcgggaaa tttgagtgtc agtaactgtg gtagactcag aaattcgtct
2641 ttgtcttgcc tctggttcct gggatccagt gatctctact ggcccagggc ttcagctctt
2701 ggttaattta ggttcatggg gaaccctctg accacctgaa tgggatgtca tagcttctaa
2761 atggagcttc tgtggaatga agtgctagac tgaaggacta ccagaataaa acagggtcta
2821 caatggggag aacttgtttt atagatgagg aaaccaaggc tcagaggggc aaagtcacct
2881 gcatggtagc acatagtgat agggtagcga tataaattta tcatataaac caggacatct
2941 cggaataaaa ggggctctgt tagtcattat gttgggtaat agccgtggca ttcctacaga
3001 acagagtgag gacaggctcc tgattcctct tccttcttta gaggagaagc ggggagtggg
3061 ttaactaaca gctttattga gatgtcattc acatgccatt cagtttaccc attgctagtg
3121 tccaattgta ttcacagaac caccatcaat tcacagaatt acagtcaacg ttggtacatt
3181 ttcatcaccc ccagtaaaac cccgtaccct tggtctgtca ctcctgcttt cctaactcct
3241 gcagtccaag gcagccatga atctactttc tatgtaagat taacctactc tggacatttc
3301 atatatctgg aatcatgtga tatctctttt gtgactggct tcttccactg aatgttttct
3361 agggccgtcc aagttgagga tgtatcagta cttcattctt ttgtattgct gaataatact
3421 tcattgtata gatagaccac atttgtttat tgattcatca gttgatggat atttgtgtgt
3481 ttttactttt tggctactct gaatgatgct gctatgaaca tatttctaca agattttgtg
3541 tggacatatg ttttcatttc ttttagcaat atacatagga gtggaattgc taggtcttac
3601 agtaactccg tgttttaact ttttgagaaa ctgccagact gttttctata gcagctgtac
3661 cattttacat tcccaccagc aatgtatcca ggtttcaatt tgtctacatc ctcatcaaca
3721 cttgctatta tctgtctttt tgcttttagc atcctaatga gtatgaaatg ctatcttgtg
3781 gttttgattt gcattcccct gatggcaact gatgctgagt gtcttttcct gtgcttacgg
3841 gccatgcgta tttctttgga gaaaggtcta tccaggtcct ttgcctattt ttaattgagt
3901 tgtctttttt tttttaagtt ttctgttttc ctaaccacta gactaccagg gatgagcctt
3961 ctttttatta ttgagttggg tgagctattt gtatattcta gacgccagtc ttttatcagg
4021 tatatgactg gtaaaaatgt tctccccttc tgtggattgt tttcagtttc ttgttggtgt
4081 cctttgagac acaaaacttt ttaactttga tgatttccaa gatacatatt ttttttctat
4141 tgtcacttgt gcttttggtg ccatatctag aaaaccattg cctaatccaa ggtcaagaag
4201 attaatgcct gtgttttctt ctaaggacta tacttttagt tctcacaatg gtctttgatc
4261 catttcgagt atatttttat atatgatgtg atgtaggggt ccagcttcat tcttttgctt
4321 gtggatctcc acttgtccca ctgctgatta ttgagaaaaa tatcctttct ccacggaatt
4381 gtcttggcat ccttgctaaa ggcctctgct tcttactgga tcttctttcc tgggacatgg
4441 tgtcgttggg aagcttacct tttttttttt ttacttagtc tgtgtttggt tccaccagtt
4501 ttatgctgcc tttctactct gttcttgctg tctccctctt tacctgagtc aacggtactg
4561 agtcctatct ctctctgatg ttccccagtc ttccttggtg catgttctag ctccacacac
4621 tagtccttgg aggaaggttg agaccaatga tttcctgtta tgagtcatga ggaaactgaa
4681 tcacctagaa gtggaataat gtgctcaggg tcaccatagc ccattagtgg aaggaccagg
4741 actagacctt tagtcttctg aggtccagcc ccttaggctg tctgtcatca ctgtacccaa
4801 gtgatgtcac taccaaggcc aaatgatggt gggctaaatt ttaattctca aaagtgtagg
4861 aggctaatat tgtcttctaa gttccaaaag aagatgtaat aaaagtctgt taccttaaaa
4921 aaaaaaaaaa aa
//