LOCUS BC064631 1527 bp mRNA linear HTC 26-JUN-2007
DEFINITION Homo sapiens chromosome 17 open reading frame 42, mRNA (cDNA clone
IMAGE:5739804), with apparent retained intron.
ACCESSION BC064631
VERSION BC064631.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1527)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1527)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 139 Row: j Column: 24
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..1527
/db_xref="H-InvDB:HIT000261550"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5739804"
/tissue_type="Duodenum, adenocarcinoma"
/clone_lib="NIH_MGC_88"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 490 a 255 c 273 g 509 t
ORIGIN
1 gtaagttgac agtgctggac tggcagcaaa gtgaccgttg gagtttaatg agaggaatat
61 actcatcatc agtctattta gaagaggtaa ggcagttgca cctccagatt cctacctgct
121 agagctcctt gtgtagttta atcttctggt cccaaaagga atgtaataaa atagtaaaga
181 tgggttttct tctggtactt gttactcact tattcctatt atgttttcca tcacctttga
241 tttttaaaaa ttcaaccttt agttagttca agaaatgcct tatgcatcga aggcagatac
301 tgagaaaatc aatggtattt cattctaaat gttatagaac attatcactc ttttatttat
361 aaagcttatt tttcaaaatg ccatcacatt gtctcatttg agttttcaaa accttgcgaa
421 atggtcagga attatcacct taatggtcag gaattaccac cttgattata catatgaaat
481 ctgtggttca gtcaagcatc tgatgtgatt agtcagttgc agaggtgatt gattcttgct
541 agttattcta accgtatgct ctatcccaga aaatgtttga aggtttagta aaacagtttt
601 aagttgtcta accttaaagc caatacatat tttagaaatt atgaagtcca ctgtacagat
661 caagaaactg gtacttagga ggactaaaca gcttagctta gctgttgttg tgacataacc
721 atgaccagaa ccagactgct cataaaatgg ctttttcagt tatttcaaaa ttgtcaatat
781 agtataaatt aactaattat aatattttta aatagaagtg ggacagagag gggaccaaac
841 ataaaatgta atgaattatt tctgctcctt tattttgtct tttttttaaa agatttcctc
901 gatcatttca aagatgccta aagcagattt ctatgttctg gaaaaaacag gactttccat
961 tcagaactca tctctgtttc caatactgtt acattttcat atcatggaag ccatgctgta
1021 tgccttatta aataaaactt ttgcccagga tgggcagcat caggtgctga gcatgaatcg
1081 aaatgcagtg gggaagcatt ttgaactgat gattggtgac tcccggacta gtggaaaaga
1141 gctagtgaag cagtttctct tcgattctat actgaaggcg gatcctcggg tgttcttccc
1201 atcagataaa atagttcact acagacagat gtttttatct actgaactac aaagagtaga
1261 agagctttat gattcattat tacaagctat tgccttctat gaattagcag tgtttgactc
1321 tcagccttag aattctgagg ttaacgtgct aaagtataat tattagctct aacgtaacac
1381 caactgttgt gaacatccat gttattggaa aagaacacat tttcagtgta ttttagatgt
1441 ttaaattctg acttttggct attaaatggt ttacacaata agccaagacc aaatcaataa
1501 acattttatg agaaaaaaaa aaaaaaa
//