LOCUS BC064613 2981 bp mRNA linear HUM 03-NOV-2006
DEFINITION Homo sapiens PHD finger protein 2, mRNA (cDNA clone IMAGE:5579260),
complete cds.
ACCESSION BC064613
VERSION BC064613.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2981)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2981)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 139 Row: d Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24797092
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..2981
/db_xref="H-InvDB:HIT000261532"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5579260"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2981
/gene="PHF2"
/gene_synonym="GRC5"
/gene_synonym="KIAA0662"
/db_xref="GeneID:5253"
/db_xref="HGNC:HGNC:8920"
/db_xref="MIM:604351"
CDS 28..1026
/gene="PHF2"
/gene_synonym="GRC5"
/gene_synonym="KIAA0662"
/codon_start=1
/product="PHF2 protein"
/protein_id="AAH64613.1"
/db_xref="GeneID:5253"
/db_xref="HGNC:HGNC:8920"
/db_xref="MIM:604351"
/translation="MATVPVYCVCRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAPD
IDIYHCPNCEKTHGKSTLKKKRTWHKHGPGQAPDVKPKNSVDLDDYEEEQDHLDACFK
DSDYVYPSLESDEDNPIFKSRSKKRKGSDDAPYSPTARVGPSVPRQDRPVREGTRVAS
IETGLAAAAAKLSQQEEQKSKKKKSAKRKLTPNTTSPSTSTSISAGTTSTSTTPASTT
PASTTPASTTPASTSTASSQASQEGSSPEPPPESHSSSLADHEYTAAGTFTGAQAGRT
SQPMAPGVFLTQRRPSASSPNNNTAAKGKRTKKGMATAKQRLGKILKIHRNGKLLL"
BASE COUNT 728 a 777 c 766 g 710 t
ORIGIN
1 ggccgagcgg cggcgcggcg cggcaacatg gcgacggtgc ccgtgtactg cgtctgccgg
61 ctcccctacg acgttacccg cttcatgatc gagtgcgacg cctgcaagga ctggttccac
121 ggcagctgtg ttggggtgga agaggaggag gcgcccgaca tcgacatata ccactgccca
181 aactgtgaga aaacccatgg gaagtccacc ttaaagaaga agcggacctg gcacaaacac
241 ggcccggggc aagcgcctga cgtcaagccc aagaacagtg tcgacctgga cgactacgag
301 gaagagcagg accacctgga tgcctgcttc aaggactcag actacgttta cccctcactg
361 gagtcagatg aagacaaccc catctttaag tcccggtcga agaaaaggaa aggctcagac
421 gacgctccct acagcccaac agcaagggtc ggcccatcgg tgccaagaca ggacaggcct
481 gtgcgtgagg gtacacgggt ggcttccatc gagaccgggc tggcggctgc tgcagctaag
541 ttgtcccagc aggaggagca gaaaagcaag aaaaaaaaga gtgccaagag gaagctgact
601 cctaacacca cctccccttc cacctccacc tccatctctg ccggcaccac ctccacctcc
661 accacgccag cctctaccac ccctgcctcc accacaccgg cctccaccac cccggcctcc
721 accagcacgg ccagcagcca ggcctcgcag gagggcagct cgccagagcc cccgcctgag
781 tcgcatagca gcagcctggc ggaccatgag tacacagccg ctggcacctt caccggggcc
841 caggctggcc gcacctccca gcccatggcc cctggggtct ttctcacaca gaggcggccc
901 tccgcatcgt ctccaaacaa caacaccgct gccaaaggaa aacgtacgaa aaagggcatg
961 gcgaccgcca agcagaggct tgggaaaatt ttgaaaattc atcggaacgg gaaactactc
1021 ctttaagatt tggaaagcca ggatccttct gctccgctca ggacccccgg agccccgcga
1081 aaacatctgc ctcccaggag ggtgccgagc tgcctcacca gggagggcct tgcctcttcc
1141 cggctgccat ctccccaaca agcgtctgtc ccttcagccg gcagagcgag cccagcgtgg
1201 cccctcaatt tgaaaatgga cgtcttttct caagttgcta agagtgatct gtcccagaaa
1261 agcggccctg caagtttgag gaccgcttat tccactttaa ggacagcctt caggccccct
1321 gagcgtgggt gtgattgcag ggcctctgca gctctgctga gagcatgagt ccttcaagga
1381 agacagagtg agccaatgct caccagcccc agagtcagag ctggccacag gctggcagcc
1441 tccaggggct taaaaaaaaa ggcaaagaac acagaaagag gaggagcaag tgggatgttt
1501 atgtcccccc ttctcttcct gagtgattct cagccaagtc cagacagtgc tcggcgggtg
1561 aggaagggtc tgccccgagc tttctggttg gcaggtggca gcaggatggt ggatgttcag
1621 cctgaatgcc caggagcatt tctggggggc agctaagact ggcagctggg ttggtgtgtt
1681 agcgggcagg ggagccattg tggggtcccc aggaaagggc aagggctcag ccacatcttg
1741 gggtctggga ggcccaggct aagccatgtg gcagggaccg tcttgccctg ctggccacac
1801 tctggagaag cacttctcag ccaaggcacc cctgccctgg gactggcagg gcaggggcag
1861 gggcagggac agtggccagg cggcccgagg acttacggtc ggcacttctc tgttctcccg
1921 tgtcagcgtg tggtgtcgcc tgcatgggtc gtacctggat ggtgtgtcca ccatcgacac
1981 ggaggggctg gatttgtttc tcaggcaatc ctgtatttta attttagatg tatttcctga
2041 agcatatttt tcatagaatg tagcgtgtaa atagcttttt aaataacttc ttttttataa
2101 gagtaaaagt atctttagga atttctttct atagagttct tcattaacat ttatacgagt
2161 tttttgctga gtcagatgga cagttgggtt ctgatgcttt ttccttctcc tttcctttta
2221 ttattattat ttttttcttt taagaactaa ggtattgcct gaaaaacaag tgatgtctgt
2281 gcagccttac actctgtctt tacagaagca aatagtacac aaaagatcta tttcagacac
2341 attttgaaga tgaatcttca actttaatac cagctctttg ttttccttgt atgatgaggg
2401 gattggggga tacagttatt ttactagcac cttgtgaagt gtttccgtgt tttgtgatgc
2461 tgtaatttat taatgtttgt agctttttat atttgtacat ttcttatgag ctttgtttat
2521 atacccatta cctggatgtt tttgtccact gggagaggca gcttggtgga ggccttatcc
2581 actcccactt gtcctgtttg gagggacgca gtccctaggg cctgagactg ggtgggagag
2641 ggggagtctc acggggcccc aggcttattc agaactggtg tttttaaagt ttcctttacc
2701 ctgcccttgt tgaacattta tataatctaa cctggacatc aagctgttct ctctctctct
2761 tttttttaat tttattatta ttattttggc aacatgtaca tttctaacaa agtttatcgt
2821 ggctattaaa gtgttttatt tcccaattca tattactctt gtatcgagtc catgaggtct
2881 aaggcaactt agatcaaagt tttaaaaaag taaaaatatt tcaggttttg tacagaaaaa
2941 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
//