LOCUS BC064592 1795 bp mRNA linear HUM 13-DEC-2004
DEFINITION Homo sapiens NMDA receptor regulated 1-like, mRNA (cDNA clone
IMAGE:5759439), complete cds.
ACCESSION BC064592
VERSION BC064592.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1795)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1795)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (22-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 139 Row: n Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, Similarity but not identity to protein
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1795
/db_xref="H-InvDB:HIT000261511"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5759439"
/tissue_type="Colon, Kidney, Stomach, adult, whole pooled"
/clone_lib="NIH_MGC_116"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1795
/gene="NARG1L"
/gene_synonym="MGC40612"
/db_xref="GeneID:79612"
CDS 250..1539
/gene="NARG1L"
/gene_synonym="MGC40612"
/codon_start=1
/product="NARG1L protein"
/protein_id="AAH64592.1"
/db_xref="GeneID:79612"
/translation="MPNVLLPPKESNLFKRILKCYEQKQYKNGLKFCKMILSNPKFAE
HGETLAMKGLTLNCLGKKEEAYEFVRKGLRNDVKSHVCWHVYGLLQRSDKKYDEAIKC
YRNALKLDKDNLQILRDLSLLQIQMRDLEGYRETRYQLLQLRPTQRASWIGYAIAYHL
LKDYDMALKLLEEFRQTQQVPPNKIDYEYSELILYQNQVMREADLLQESLEHIEMYEK
QICDKLLVEEIKGEILLKLGRLKEASEVFKNLIDRNAENWCYYEGLEKALQISTLEER
LQIYEEISKQHPKAITPRRLPLTLVPGERFRELMDKFLRVNFSKGCPPLFTTLKSLYY
NTEKVSIIQELVTNYEASLKTCDFFSPYENGEKEPPTTLLWVQYFLAQHFDKLGQYSL
ALDYINAAIASTPTLIELFYMKAKIYKVKSESCFLSS"
BASE COUNT 598 a 349 c 366 g 482 t
ORIGIN
1 accgccgccg ccgccgctgg ccaaaaagcg gagcccaggg gaagcgtgtc ctgctcagac
61 cgccttcctt ctccattgcc acccgtgccg aacagccagg ctgcccaatt gcaactgtag
121 accaatgaac taatccatcg cccgcagccc gactctcagc agcggttcgt cccggtgccc
181 acccccgcga agcggagcgc ccgggcacct agcctccctg ccggccacct agcctccctg
241 ccggccacga tgccgaacgt gctgctgccg cccaaggaga gcaacctctt caaacgcatc
301 ttgaaatgtt atgaacagaa gcagtacaaa aatggcctca agttttgcaa gatgattctg
361 tcgaacccaa aatttgctga acatggagag actttggcta tgaaaggatt aacactgaac
421 tgtttaggaa aaaaagaaga agcttatgag tttgttcgta aaggacttcg taatgatgtc
481 aagagtcatg tctgttggca tgtatatgga ctcttgcagc gttctgataa aaaatatgat
541 gaagctataa aatgttaccg aaatgccctc aaattagata aagataacct gcaaattttg
601 agggatctct cactgttgca gatccaaatg agagaccttg aaggttaccg agagacaaga
661 taccagcttc ttcagttgcg ccccacacag cgtgcctcct ggattggata tgctattgca
721 taccatttgc tgaaagatta tgatatggcc ctaaaactgt tggaagaatt tagacaaact
781 cagcaagttc ctccaaacaa aatagattat gaatatagtg aattgatatt ataccagaat
841 caagtgatga gagaggcaga tctgttgcag gaatctttgg aacatataga aatgtatgag
901 aaacaaatat gtgataaact tttggtggaa gaaattaaag gggaaatact gttgaaattg
961 ggaagattaa aagaagccag tgaagtgttc aaaaacttga ttgatcgaaa tgcagaaaac
1021 tggtgttatt atgaaggctt ggaaaaagct ctacaaatta gcactttaga agagaggctt
1081 caaatttatg aagaaattag taagcagcac cccaaagcaa ttacacccag aagattacct
1141 ttgactcttg tcccaggtga aagatttaga gaactaatgg ataagttcct gagggttaac
1201 ttcagtaaag gctgcccacc cttgtttact actttgaaat ctttatatta caatacagaa
1261 aaggtttcta taatccagga acttgttact aattatgaag cctctcttaa aacgtgtgac
1321 ttttttagcc catatgagaa tggggagaag gaacccccga caacactact ctgggttcag
1381 tatttcctgg cacagcactt tgataaactt ggacagtatt ctttggcttt ggattatatt
1441 aatgctgcaa ttgctagtac tccaactcta atagaattat tctatatgaa agcaaaaatt
1501 tacaaggtaa aatctgaatc ctgttttttg agtagttgaa gaattcagct actttaagaa
1561 tccttggagt tttttctttg tggaaacaag ttctagggca ccctgataat ctttttctaa
1621 taatcctgtg tagtttcatg ttatattaat tgtataatca atgtgtaatt agatgtgtaa
1681 tcatttgagc tcttagtaaa tgtgaactgt aattttgatt tctaaataaa tttgacagaa
1741 atggtgacaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
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