LOCUS BC064567 4718 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens enhancer of mRNA decapping 4, mRNA (cDNA clone
MGC:70559 IMAGE:5575195), complete cds.
ACCESSION BC064567
VERSION BC064567.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4718)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4718)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 139 Row: d Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 45827770.
FEATURES Location/Qualifiers
source 1..4718
/db_xref="H-InvDB:HIT000261486"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:70559 IMAGE:5575195"
/tissue_type="Testis, embryonal carcinoma"
/clone_lib="NIH_MGC_92"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..4718
/gene="EDC4"
/gene_synonym="Ge-1"
/gene_synonym="HEDLS"
/gene_synonym="RCD-8"
/db_xref="GeneID:23644"
/db_xref="HGNC:HGNC:17157"
/db_xref="MIM:606030"
CDS 137..4342
/gene="EDC4"
/gene_synonym="Ge-1"
/gene_synonym="HEDLS"
/gene_synonym="RCD-8"
/codon_start=1
/product="enhancer of mRNA decapping 4"
/protein_id="AAH64567.1"
/db_xref="GeneID:23644"
/db_xref="HGNC:HGNC:17157"
/db_xref="MIM:606030"
/translation="MASCASIDIEDATQHLRDILKLDRPAGGPSAESPRPSSAYNGDL
NGLLVPDPLCSGDSTSANKTGLRTMPPINLQEKQVICLSGDDSSTCIGILAKEVEIVA
SSDSSISSKARGSNKVKIQPVAKYDWEQKYYYGNLIAVSNSFLAYAIRAANNGSAMVR
VISVSTSERTLLKGFTGSVADLAFAHLNSPQLACLDEAGNLFVWRLALVNGKIQEEIL
VHIRQPEGTPLNHFRRIIWCPFIPEESEDCCEESSPTVALLHEDRAEVWDLDMLRSSH
STWPVDVSQIKQGFIVVKGHSTCLSEGALSPDGTVLATASHDGYVKFWQIYIEGQDEP
RCLHEWKPHDGRPLSCLLFCDNHKKQDPDVPFWRFLITGADQNRELKMWCTVSWTCLQ
TIRFSPDIFSSVSVPPSLKVCLDLSAEYLILSDVQRKVLYVMELLQNQEEGHACFSSI
SEFLLTHPVLSFGIQVVSRCRLRHTEVLPAEEENDSLGADGTHGAGAMESAAGVLIKL
FCVHTKALQDVQIRFQPQLNPDVVAPLPTHTAHEDFTFGESRPELGSEGLGSAAHGSQ
PDLRRIVELPAPADFLSLSSETKPKLMTPDAFMTPSASLQQITASPSSSSSGSSSSSS
SSSSSLTAVSAMSSTSAVDPSLTRPPEELTLSPKLQLDGSLTMSSSGSLQASPRGLLP
GLLPAPADKLTPKGPGQVPTATSALSLELQEVEPLGLPQASPSRTRSPDVISSASTAL
SQDIPEIASEALSRGFGSSAPEGLEPDSMASAASALHLLSPRPRPGPELGPQLGLDGG
PGDGDRHNTPSLLEAALTQEASTPDSQVWPTAPDITRETCSTLAESPRNGLQEKHKSL
AFHRPPYHLLQQRDSQDASAEQSDHDDEVASLASASGGFGTKVPAPRLPAKDWKTKGS
PRTSPKLKRKSKKDDGDAAMGSRLTEHQVAEPPEDWPALIWQQQRELAELRHSQEELL
QRLCTQLEGLQSTVTGHVERALETRHEQEQRRLERALAEGQQRGGQLQEQLTQQLSQA
LSSAVAGRLERSIRDEIKKTVPPCVSRSLEPMAGQLSNSVATKLTAVEGSMKENISKL
LKSKNLTDAIARAAADTLQGPMQAAYREAFQSVVLPAFEKSCQAMFQQINDSFRLGTQ
EYLQQLESHMKSRKAREQEAREPVLAQLRGLVSTLQSATEQMAATVAGSVRAEVQHQL
HVAVGSLQESILAQVQRIVKGEVSVALKEQQAAVTSSIMQAMRSAAGTPVPSAHLDCQ
AQQAHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDPAQVFGQPPCPLSQPVLLS
LIQQLASDLGTRTDLKLSYLEEAVMHLDHSDPITRDHMGSVMAQVRQKLFQFLQAEPH
NSLGKAARRLSLMLHGLVTPSLP"
BASE COUNT 1008 a 1421 c 1374 g 915 t
ORIGIN
1 cggtttgcga actgcgggtg gactgtgtag tgaccggcgt cccgctgtct cgccccgtgg
61 cgggtgagcg agggtgcgtg gtgcgcggcg gcggcggaac gaacgcggtg cgggcggggc
121 gcccgccgca gggcccatgg cctcctgcgc gagcatcgac atcgaggacg ccacgcagca
181 cctgcgggac atcctcaagc tggaccggcc cgcgggcggc cccagtgcag agagcccacg
241 gccatccagt gcctacaatg gggacctcaa tggacttctg gtcccagacc cgctctgctc
301 aggtgatagt acctcagcaa acaagactgg tcttcggacc atgccaccca ttaacctgca
361 agagaagcag gtcatctgtc tctcaggaga tgatagctcc acctgcattg ggattttggc
421 caaggaggtg gagattgtgg ctagcagtga ctctagcatt tcaagcaagg cccggggaag
481 caacaaggtg aaaattcagc ctgtcgccaa gtatgactgg gaacagaagt actactatgg
541 caacctgatt gctgtgtcta actccttctt ggcctatgcc attcgggctg ccaacaatgg
601 ctctgccatg gtgcgggtga tcagcgtcag cacttcggag cggaccttgc tcaagggctt
661 cacaggcagt gtggctgatc tggctttcgc gcacctcaac tctccacagc tggcctgcct
721 ggatgaggca ggcaacctgt tcgtgtggcg cttggctctg gttaatggca aaattcaaga
781 agagatcttg gtccatattc ggcagccaga gggcacgcca ctgaaccact ttcgcaggat
841 catctggtgc cccttcatcc ctgaggagag cgaagactgc tgtgaggaga gcagcccaac
901 agtggccctg ctgcatgaag accgggctga ggtgtgggac ctggacatgc tccgctccag
961 ccacagtacc tggcctgtgg atgttagcca gatcaagcag ggcttcattg tggtaaaagg
1021 tcatagcacg tgcctcagtg aaggagccct ctctcctgat gggactgtgc tggctactgc
1081 gagccacgat ggctatgtca agttctggca gatctacatt gaggggcaag atgagccaag
1141 gtgtctgcac gagtggaaac ctcatgatgg gcggcccctc tcctgcctcc tgttctgtga
1201 caaccataag aaacaagacc ctgatgtccc tttctggagg ttccttatta ctggtgctga
1261 ccagaaccga gagttaaaga tgtggtgtac agtatcctgg acctgcctgc agactattcg
1321 cttctcccca gatatcttca gctcagtgag tgtgccccct agcctcaagg tttgcttgga
1381 cctctcagca gaatacctga ttctcagcga tgtgcaacgg aaggtcctct atgtgatgga
1441 gctgctgcaa aaccaggagg agggccacgc ctgcttcagc tccatctcgg agttcctgct
1501 cacccaccct gtgctgagct ttggtatcca ggttgtgagt cgctgccggc tacggcacac
1561 tgaggtgctg cctgccgaag aggaaaatga cagcctgggt gctgatggta cccatggagc
1621 cggtgccatg gagtctgcgg ccggtgtgct catcaagctc ttttgtgtgc atactaaggc
1681 actgcaagat gtgcagatcc gcttccagcc acagctgaac cctgatgtgg tggccccact
1741 gcccacccac actgcccacg aggacttcac atttggagag tctcggcccg aactgggctc
1801 tgagggcctg gggtcagccg ctcacggctc ccagcctgac ctccgacgaa tcgtggagct
1861 gcctgcacct gccgacttcc tcagtctgag cagtgagacc aagcccaagt tgatgacacc
1921 tgacgccttc atgacaccta gcgcctcctt gcagcagatc actgcctctc ccagcagcag
1981 cagcagcggt agcagcagca gcagcagcag tagcagcagc tcccttacag ctgtgtctgc
2041 catgagcagc acctcagctg tggacccctc cttgaccagg ccacctgagg agctgacctt
2101 gagccccaag ctgcagctgg atggcagcct gacaatgagc agcagtggca gccttcaggc
2161 aagcccgcgt ggcctcctgc ctggcctgct cccagcccca gctgacaaac tgactcccaa
2221 ggggccgggc caggtgccta ctgccacctc tgcactgtcc ctggagctgc aggaagtgga
2281 gcccctgggg ctaccccaag cctcccctag ccgcactcgt tcccctgatg tcatctcctc
2341 agcttccact gccctgtccc aggacatccc tgagattgca tctgaggccc tgtcccgtgg
2401 ttttggctcc tctgcaccag agggccttga gccagacagt atggcttcag ccgcctcggc
2461 actgcacctg ctgtccccac ggccccggcc agggcccgag ctcggccccc agctcgggct
2521 tgatggaggc cctggggatg gagatcggca taataccccc tccctcctgg aggcagcctt
2581 gacccaggag gcctcgactc ctgacagtca ggtttggccc acagcacctg acattactcg
2641 tgagacctgc agcaccctgg cagaaagccc caggaatggc cttcaggaaa agcacaagag
2701 cctggccttc caccgaccac catatcacct gctgcagcaa cgtgacagcc aggatgccag
2761 tgctgagcaa agtgaccatg atgatgaggt ggccagcctt gcctctgctt caggaggctt
2821 tggcaccaaa gttcctgctc cacggctgcc tgccaaggac tggaagacca agggatcccc
2881 tcgaacctca cccaagctca agaggaaaag caagaaggat gatggggatg cagccatggg
2941 atcccggctc acagagcacc aggtggcaga gccccctgag gactggccag cactaatttg
3001 gcaacagcag agagagctgg cagagctgcg gcacagccag gaagagctgc tgcagcgtct
3061 gtgtacccaa ctcgaaggcc tgcagagcac agtcacaggc cacgtagaac gtgcccttga
3121 gactcggcac gagcaggaac agcggcggct ggagcgagca ctggctgagg ggcagcagcg
3181 gggagggcag ctgcaggagc agctgacaca acagttgtcc caagcactgt cgtcagctgt
3241 agctgggcgg ctagagcgca gcatacggga tgagatcaag aagacagtcc ctccatgtgt
3301 ctcaaggagt ctggagccta tggcaggcca actgagcaac tcagtggcta ccaagctcac
3361 agctgtggag ggcagcatga aagagaacat ctccaagctg ctcaagtcca agaacttgac
3421 tgatgccatc gcccgagcag ctgcagacac attacaaggg ccgatgcagg ctgcctaccg
3481 ggaagccttc cagagtgtgg tgctgccggc ctttgagaag agctgccagg ccatgttcca
3541 gcaaatcaat gatagcttcc ggctggggac acaggaatac ttgcagcagc tagaaagcca
3601 catgaagagc cggaaggcac gggaacagga ggccagggag cctgtgctag cccagctgcg
3661 gggcctggtc agcacactgc agagtgccac tgagcagatg gcagccaccg tggccggcag
3721 tgttcgtgct gaggtgcagc accagctgca tgtggctgtg ggcagcctgc aggagtccat
3781 tttagcacag gtacagcgca tcgttaaggg tgaggtgagt gtggcgctca aggagcagca
3841 ggccgccgtc acctccagca tcatgcaggc catgcgctca gctgctggca cacctgtccc
3901 ctctgcccac cttgactgcc aggcccagca agcccatatc ctgcagctgc tgcagcaggg
3961 ccacctcaat caggccttcc agcaggcgct gacagctgct gacctgaacc tggtgctgta
4021 tgtgtgtgaa actgtggacc cagcccaggt ttttgggcag ccaccctgcc cgctctccca
4081 gcctgtgctc ctttccctca tccagcagct ggcatctgac cttggcactc gaactgacct
4141 caagctcagc tacctggaag aggccgtgat gcacctggac cacagtgacc ccatcactcg
4201 ggaccacatg ggctccgtta tggcccaggt gcgccaaaag ctttttcagt tcctgcaggc
4261 tgagccacac aactcacttg gcaaagcagc tcggcgtctc agcctcatgc tgcatggcct
4321 cgtgaccccc agcctccctt agctgctaag cctgccttgc ccaggggtgg gatggcactg
4381 aaggccagca gacaggccta ggctggggca gggtcacggc tggcctttac ctgctcaggc
4441 ccccatctct ggggtgtttg ggggtcaggg agcagggagc actggccgtg gtctacagcg
4501 tgtggtagtc agaaggttta gctgggccca gggcaggtat tgcgcctgct tgggttctgc
4561 catgcctgga gcatgaccct gagatcgtga caccacttga gtggaatttt ccatgttcct
4621 ttttacctct aatttggatc tttttgtttt tgaaaaacat tgagaaattc aattaaatgc
4681 ttttggaata aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//