LOCUS BC064538 2425 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens transmembrane protein 200B, mRNA (cDNA clone
IMAGE:5723682), partial cds.
ACCESSION BC064538
VERSION BC064538.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2425)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2425)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Invitrogen
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 139 Row: g Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 51242136.
FEATURES Location/Qualifiers
source 1..2425
/db_xref="H-InvDB:HIT000261457"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5723682"
/tissue_type="Ovary, pooled from 3 adults"
/clone_lib="NIH_MGC_125"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..2425
/gene="TMEM200B"
/gene_synonym="TTMB"
/db_xref="GeneID:399474"
/db_xref="HGNC:HGNC:33785"
CDS <1..923
/gene="TMEM200B"
/gene_synonym="TTMB"
/codon_start=3
/product="TMEM200B protein"
/protein_id="AAH64538.1"
/db_xref="GeneID:399474"
/db_xref="HGNC:HGNC:33785"
/translation="TAGSPEECGEVRRSPEGRVSRLGRRLGRRRRPRSPPEPLRVRAR
LRLRSPSGAFAALGALVVLVGMGIAVAGYWPHRAGAPGSRAANASSPQMSELRREGRG
GGRAHGPHERLRLLGPVIMGVGLFVFICANTLLYENRDLETRRLRQGVLRAQALRPPD
GPGWDCALLPSPGPRSPRAVGCAEPEIWDPSPRRGTSPVPSVRSLRSEPANPRLGLPA
LLNSYPLKGPGLPPPWGPRTQTGHVIITVQPSGSCIEHSKSLDLGLGELLLGAPAARD
CAHRSWPRLDRLSLGGYAKLGGGGDLGARV"
BASE COUNT 511 a 680 c 725 g 509 t
ORIGIN
1 tgacggccgg gagccccgaa gaatgcgggg aggtgcggag gagccccgag ggccgcgtct
61 ctcgcttggg ccgccgcctg ggccgccgcc ggcgcccgcg ctccccgccc gagcctctgc
121 gggtgcgggc gcggctgcgg ctgcgctcgc cgtcgggggc gttcgcggcg ctgggggcgc
181 tcgtggtact ggtgggtatg ggcattgcag tggccggcta ctggccgcac cgggccgggg
241 ccccagggtc ccgggccgcc aatgccagct cgccccagat gagcgagctg cgacgcgagg
301 gtcgcggcgg gggccgggct cacggcccgc acgagcggct gcggctcctc gggccggtga
361 tcatgggcgt cggcctgttc gtgttcatct gcgccaacac actgctgtat gagaaccgag
421 acttggagac gcgacggctc cgccaggggg tgctgcgggc ccaggcgctc cggccccccg
481 acggcccggg ctgggactgc gccctccttc ccagccccgg ccctaggagt ccccgagccg
541 taggctgcgc agagccagaa atctgggacc cgtccccgcg tcggggtact tcacccgtcc
601 cgtcagtgcg gagtctgcgt tcagagcccg ctaatcctcg cttggggtta cctgccttgc
661 tcaacagcta cccgctgaag ggccccgggc tgcccccacc ctggggtcca cggacgcaga
721 ctggccatgt gatcatcacc gtgcagccgt ctggctcctg cattgaacat tccaagtctc
781 tggatctggg ccttggggag ctcctccttg gggccccagc agctcgggac tgtgctcacc
841 gaagctggcc acggctggac cgcctcagtc ttgggggcta tgccaaattg ggaggaggag
901 gggacttggg ggcccgggtc tgaagagagg ggagacagcc tgctctgagg ctgcagcatg
961 gaccatgcta ataggaccaa aggaccagga gtcccaacgt ctaatagatg tttcagtcac
1021 atcccaggct ggggatggat gctctgacca cagcagctgt gaagggcatc ctgacctgca
1081 tgcgggcaga gaaatgccag ctgcaccagg gctcagtgag ctggagaggg tgcgtttcac
1141 tgtggggtgt ggaggactcg cctcaggaat ttcttcagcc tctgtaagtg gccttagccc
1201 taacagggct ggaggtccag gccagggtga ctgggagatg tacccagtgt cttggcaaac
1261 ccaagaaagt ggtgggcaag ggcccctaag actgggaggt aggttgggat gttacaggct
1321 ggggcaggct ccctccaagg cggcactggt gatggagtgt ggggcctctg ggaagatgga
1381 ccacgggatg agactctcca ctgccatctg ggacggggac tgagccttga actcctacca
1441 cctcaatccc tttcttccct cagccatctg gggtatatcc ctctagagct acactactgc
1501 caatgccttc atactgagtt ctgggcccct ctgcaaataa gtctgagaag ccccttctct
1561 ccttccttta tcgtggccta tgctgcagaa tctcactgca gctggcaaaa ggcattggcc
1621 agctctcaga aatcccttta ctcaacgttg aagctgcatt ttggtcaatg tgggtaactt
1681 actttagaaa atgacttgag tttaggtctc ccccacccat atttaatttt tcccaagttg
1741 ctggtagaag agaaatttaa aagtggatca atcctcacag agagagttct ttttgttgtt
1801 gtttattgaa aaaaatgcaa tacaagaagc aagaccaaac agatatctaa acactacaac
1861 cacttctact acgaaaggcc aaaacagcag acttgattat tgcctgtgta gtctaaagat
1921 tctgccaatc tgattctgct gcccgagttc ctattttttc aagaaatgta aacaactact
1981 tgatatgatt cataatttta aaaaaattta caaagctcct tcatttttgt caccaaaata
2041 atacatttga gagagatttg tagaaacaac cagcctgggg ctgagatcct gggcagaaat
2101 ttcccgtgag catcaaaagg cgtcagtcag gccgcagctc tggctccagt tcccgaggtt
2161 tgttgtctcc tcacccccag ctgccaagca tccccccaac acacactgat gggcccagcg
2221 gtggaggggg gggtggggac ggggatgggt cacggggccc tgacgggtcc cgcagttagg
2281 ctccctgagc cctcggctta taaatacagg tcttgctttg tgggtgggtg ccagagtcct
2341 catgtggctt ggaggaaatc tttatttctc aaattaaaat aaaattgcag cgagagttga
2401 aaaaaaaaaa aaaaaaaaaa aaaaa
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