LOCUS BC064497 2817 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens potassium inwardly-rectifying channel, subfamily J,
member 11, mRNA (cDNA clone MGC:71115 IMAGE:6279724), complete cds.
ACCESSION BC064497
VERSION BC064497.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2817)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2817)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Mark Watson
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 50 Row: l Column: 3.
FEATURES Location/Qualifiers
source 1..2817
/db_xref="H-InvDB:HIT000261417"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71115 IMAGE:6279724"
/tissue_type="Spleen"
/clone_lib="NIH_MGC_113"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2817
/gene="KCNJ11"
/gene_synonym="BIR"
/gene_synonym="HHF2"
/gene_synonym="IKATP"
/gene_synonym="KIR6.2"
/gene_synonym="PHHI"
/db_xref="GeneID:3767"
/db_xref="HGNC:HGNC:6257"
/db_xref="MIM:600937"
CDS 568..1740
/gene="KCNJ11"
/gene_synonym="BIR"
/gene_synonym="HHF2"
/gene_synonym="IKATP"
/gene_synonym="KIR6.2"
/gene_synonym="PHHI"
/codon_start=1
/product="potassium inwardly-rectifying channel, subfamily
J, member 11"
/protein_id="AAH64497.1"
/db_xref="GeneID:3767"
/db_xref="HGNC:HGNC:6257"
/db_xref="MIM:600937"
/translation="MLSRKGIIPEEYVLTRLAEDPAEPRYRARQRRARFVSKKGNCNV
AHKNIREQGRFLQDVFTTLVDLKWPHTLLIFTMSFLCSWLLFAMAWWLIAFAHGDLAP
SEGTAEPCVTSIHSFSSAFLFSIEVQVTIGFGGRMVTEECPLAILILIVQNIVGLMIN
AIMLGCIFMKTAQAHRRAETLIFSKHAVIALRHGRLCFMLRVGDLRKSMIISATIHMQ
VVRKTTSPEGEVVPLHQVDIPMENGVGGNSIFLVAPLIIYHVIDANSPLYDLAPSDLH
HHQDLEIIVILEGVVETTGITTQARTSYLADEILWGQRFVPIVAEEDGRYSVDYSKFG
NTIKVPTPLCTARQLDEDHSLLEALTLASARGPLRKRSVPMAKAKPKFSISPDSLS"
BASE COUNT 524 a 864 c 849 g 580 t
ORIGIN
1 ggcagggttg ggggctccct aggcgccagg caggtgggct caagggtgag gctgtttttt
61 tgttttgttt tttgtttttg agacggagtc tcgctctgtc gcccaggctg gagtgcagtg
121 gcgtgatctt ggctcactgc aacctccgcc tctcgggttc aagcgattct cctgcctcag
181 cttcctgagt agctgggatt acaggtgcgc accaccatgc ccggctaact tttgtatttt
241 tagtagagat ggggtttcac catgttggtc aggctggtct cgaactcctg acctagtgat
301 ctgccctcct cagcctccca acgtactggg attacaggcg tgagccaccg cgcccggcct
361 gaggctggta ttaagaagtg aagtgggacc caggtggagg taaggaagag tctggtgggg
421 agttatctca gaagtgaggc cagcacaggc tgagtgcagc cccagggtga gaaggtgccc
481 accgagagga ctctgcagtg aggccctagg ccacgtccga ggggtgcctc cgatggggga
541 agcccctccc tgggggtcac cggagccatg ctgtcccgca agggcatcat ccccgaggaa
601 tacgtgctga cacgcctggc agaggaccct gccgagccca ggtaccgtgc ccgccagcgg
661 agggcccgct ttgtgtccaa gaaaggcaac tgcaacgtgg cccacaagaa catccgggag
721 cagggccgct tcctgcagga cgtgttcacc acgctggtgg acctcaagtg gccacacaca
781 ttgctcatct tcaccatgtc cttcctgtgc agctggctgc tcttcgccat ggcctggtgg
841 ctcatcgcct tcgcccacgg tgacctggcc cccagcgagg gcactgctga gccctgtgtc
901 accagcatcc actccttctc gtctgccttc cttttctcca ttgaggtcca agtgactatt
961 ggctttgggg ggcgcatggt gactgaggag tgcccactgg ccatcctgat cctcatcgtg
1021 cagaacatcg tggggctcat gatcaacgcc atcatgcttg gctgcatctt catgaagact
1081 gcccaagccc accgcagggc tgagaccctc atcttcagca agcatgcggt gatcgccctg
1141 cgccacggcc gcctctgctt catgctacgt gtgggtgacc tccgcaagag catgatcatc
1201 agcgccacca tccacatgca ggtggtacgc aagaccacca gccccgaggg cgaggtggtg
1261 cccctccacc aggtggacat ccccatggag aacggcgtgg gtggcaacag catcttcctg
1321 gtggccccgc tgatcatcta ccatgtcatt gatgccaaca gcccactcta cgacctggca
1381 cccagcgacc tgcaccacca ccaggacctc gagatcatcg tcatcctgga aggcgtggtg
1441 gaaaccacgg gcatcaccac ccaggcccgc acctcctacc tggccgatga gatcctgtgg
1501 ggccagcgct ttgtgcccat tgtagctgag gaggacggac gttactctgt ggactactcc
1561 aagtttggca acaccatcaa agtgcccaca ccactctgca cggcccgcca gcttgatgag
1621 gaccacagcc tactggaagc tctgaccctc gcctcagccc gcgggcccct gcgcaagcgc
1681 agcgtgccca tggccaaggc caagcccaag ttcagcatct ctccagattc cctgtcctga
1741 gccatggtct ctcgggcccc ccacacgcgt gtgtacacac ggaccatgtg gtatgtagcc
1801 cagccagggc ctggtgtgag gctgggccag cctcagctca gcctccccct gctgctcatc
1861 cagggtgtta caaggcactt gtcactatgc tatttctggc ctcagcagga acctgtactg
1921 ggttattttt gtccctgctc ctcccaaccc aatttaggac tggctcaccc ctctcccccg
1981 cccaaggctg cagaggctgt gggaggtact gggccctaga gctgtgcgtc cagccagtcc
2041 tgggtcccca cgattgacca gccacactct gggccggtgg ctggggaaga acaatccccg
2101 agggctgctg ctttgcgtct gtggctccaa gaagtgcctg tggtcaggcc ccagctctac
2161 ttggtccctg aaaaagcacc cggctaaggg ctgggcctgg ccagcaggga gggcagttga
2221 tgagagaggg tgttcccgct ggagggttgg tgctgtggag cctacaccgg cagggacagc
2281 ctggggctga cagggctccc ctccgagggc cagtttcagg tctggaaggg gaggaagcag
2341 gggaaggtga cctgaggagg ctcggctttg tagagccccg ctcaggcaca gggaggagga
2401 gatgccaggg ctcctgcctt ttgccacatc ggcctcgtgc agtgagggct ctgtgggctg
2461 gggctgctgc ccctgcctac ctcctgcctg tccccagagg ctgaggagag ggggtactgt
2521 gcccaccaca catgattagg cctcagaccc aactctggtc ctggctccac aacagtggct
2581 gccactcact ttgtccagaa ggtggcttgg gggtggatat ctttgggttg ctggaaaagg
2641 tgtgggaagg ttcaggatgg tgggagggac tgaggtccct gaggtgaaga ggcccttggt
2701 cctgacgggt ttgacccgtg cctggaccct tggagcagtg ttgtgtgaac ttgcctagaa
2761 ctctgccttc tccgttgtca ataaagcctc cccctcatga aaaaaaaaaa aaaaaaa
//