LOCUS BC064413 1687 bp mRNA linear HUM 07-AUG-2007
DEFINITION Homo sapiens splicing factor, arginine/serine-rich 18, mRNA (cDNA
clone IMAGE:5745464), complete cds.
ACCESSION BC064413
VERSION BC064413.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1687)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1687)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 139 Row: k Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 18699723
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1687
/db_xref="H-InvDB:HIT000261376"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5745464"
/tissue_type="Blood, adult leukocytes"
/clone_lib="NIH_MGC_118"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1687
/gene="SFRS18"
/gene_synonym="bA98I9.2"
/gene_synonym="DKFZp564B0769"
/gene_synonym="HSPC306"
/gene_synonym="RP11-98I9.2"
/gene_synonym="SRrp130"
/db_xref="GeneID:25957"
/db_xref="HGNC:HGNC:21222"
CDS 177..1001
/gene="SFRS18"
/gene_synonym="bA98I9.2"
/gene_synonym="DKFZp564B0769"
/gene_synonym="HSPC306"
/gene_synonym="RP11-98I9.2"
/gene_synonym="SRrp130"
/codon_start=1
/product="SFRS18 protein"
/protein_id="AAH64413.1"
/db_xref="GeneID:25957"
/db_xref="HGNC:HGNC:21222"
/translation="MWDQGGQPWQQWPLNQQQWMQSFQHQQDPSQIDWAALAQAWIAQ
REASGQQSMVEQPPGMMPNGQDMSTMESGPNNHGNFQGDSNFNRMWQPEWGMHQQPPH
PPPDQPWMPPTPGPMDIVPPSEDSNSQDSGEFAPDNRHIFNQNNHNFGGPPDNFAVGP
VNQFDYQHGAAFGPPQGGFHPPYWQPGPPGPPAPPQNRRERPSSFRDRQRSPIALPVK
QEPPQIDAVKRRTLPAWIREGLEKMEREKQKKLEKERMEQQRSQLSKKRKKGHRRC"
BASE COUNT 598 a 351 c 412 g 326 t
ORIGIN
1 gaagcatcga aagcgttgga gaggtgttac cggaacggcg gcgacaaggg tgttcccgaa
61 ctagagtggg gcatacataa tcttgctgct atgcttcgaa gctgtagtct gaatcaacct
121 aagttttaaa cagaaggtga acctctgaga aaatcaagta tattttaaaa gaagggatgt
181 gggatcaagg aggacagcct tggcagcagt ggcccttgaa ccagcaacaa tggatgcagt
241 cattccagca ccaacaggat ccaagccaga ttgattgggc tgcattggcc caagcttgga
301 ttgcccaaag agaagcttca ggacagcaaa gcatggtaga acaaccacca ggaatgatgc
361 caaatggaca agatatgtct acaatggaat ctggtccaaa caatcatggg aatttccaag
421 gggattcaaa cttcaacaga atgtggcaac cagaatgggg aatgcatcag caacccccac
481 acccccctcc agatcagcca tggatgccac caacaccagg cccaatggac attgttcctc
541 cttctgaaga cagcaacagt caggacagtg gggaatttgc ccctgacaac aggcatatat
601 ttaaccagaa caatcacaac tttggtggac cacccgataa ttttgcagtg gggccagtga
661 accagtttga ctatcagcat ggggctgctt ttggtccacc gcaaggtgga tttcatcctc
721 cttattggca accaggacct ccaggacctc cagcacctcc ccagaatcga agagaaaggc
781 catcatcatt cagggatcgt cagcgttcac ctattgcact tcctgtgaag caggagcctc
841 cacaaattga cgcagtaaaa cgcaggactc ttcccgcttg gattcgcgaa ggtcttgaaa
901 aaatggaacg tgaaaagcag aagaaattgg agaaagaaag aatggaacaa caacgttcac
961 aattgtccaa aaaaagaaaa aaaggccaca gaagatgctg aaggagggga tggccctcgt
1021 ttacctcaga gaagtaaatt tgatagtgat gaggaagaag aagacactga aaatgttgag
1081 gctgcaagta gtgggaaagt caccagaagt ccatccccag ttcctcaaga agagcacagt
1141 gaccctgaga tgactgaaga ggagaaagag tatcaaatga tgttgctgac aaaaatgctt
1201 ctaacagaaa ttctgctgga tgtcacagat gaagaaattt attacgtagc caaagatgca
1261 caccgcaaag caacgaaagc tcctgcaaaa cagctggcac agtccagtgc actggcttcc
1321 ctcactggac tcggtggact gggtggttat ggatcaggag acagtgaaga tgagaggagt
1381 gacagaggat ctgagtcatc tgacactgat gatgaagaat tacggcatcg aatccggcaa
1441 aaacaggaag ctttttggag aaaagaaaaa gaacagcagc tattacatga taaacagatg
1501 gaagaagaaa agcagcaaac agaaagggtt acaaaagaga tgaatgaatt tatccataaa
1561 gagcaaaata gtttatcact actagaagca agagaagcag acggtgatgt ggttaatgaa
1621 aagaagagaa ctccaaatga aaccacatca gttttagaac caaaaaaaaa aaaaaaaaaa
1681 aaaaaaa
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