LOCUS BC064409 2309 bp mRNA linear HUM 02-JAN-2004 DEFINITION Homo sapiens hippocampus abundant transcript 1, mRNA (cDNA clone IMAGE:5737455), partial cds. ACCESSION BC064409 VERSION BC064409.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2309) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2309) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (15-DEC-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 139 Row: i Column: 20 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 24308343. FEATURES Location/Qualifiers source 1..2309 /db_xref="H-InvDB:HIT000261372" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5737455" /tissue_type="Duodenum, adenocarcinoma" /clone_lib="NIH_MGC_88" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene <1..2309 /gene="HIAT1" /gene_synonym="DKFZP564L0864" /db_xref="GeneID:64645" CDS <1..1130 /gene="HIAT1" /gene_synonym="DKFZP564L0864" /codon_start=3 /product="HIAT1 protein" /protein_id="AAH64409.1" /db_xref="GeneID:64645" /translation="IPLMKISPWWYFAVISVSGVFAVTFSVVFAYVADITQEHERSMA YGLVSATFAASLVTSPAIGAYLGRVYGDSLVVVLATAIALLDICFILVAVPESLPEKM RPASWGAPISWEQADPFASLKKVGQDSIVLLICITVFLSYLPEAGQYSSFFLYLRQIM KFSPESVAAFIAVLGILSIIAQTIVLSLLMRSIGNKNTILLGLGFQILQLAWYGFGSE PWMMWAAGAVAAMSSITFPAVSALVSRTADADQQGVVQGMITGIRGLCNGLGPALYGF IFYIFHVELKELPITGTDLGTNTSPQHHFEQNSIIPGPPFLFGACSVLLALLVALFIP EHTNLSLRSSSWRKHCGSHSHPHNTQAPGEAKEPLLQDTNV" BASE COUNT 676 a 423 c 439 g 771 t ORIGIN 1 caattccttt aatgaagatc agcccatggt ggtactttgc tgttatctct gtttctgggg 61 tttttgcagt gactttttct gtggtatttg catacgtagc agatataacc caagagcatg 121 aaagaagtat ggcttatgga ctggtttcag caacatttgc tgcaagttta gtcaccagtc 181 ctgcaattgg agcttatctt ggacgagtat atggggacag cttggtggtg gtcttagcta 241 cagcaatagc tttgctagat atttgtttta tccttgttgc tgtgccagag tcgttgcctg 301 agaaaatgcg gccagcatcc tggggagcac ccatttcctg ggaacaagct gacccttttg 361 cgtccttaaa aaaagtcggc caagattcca tagtgctgct gatctgcatt acagtgtttc 421 tctcctacct accggaggca ggccaatatt ccagcttttt tttatacctc agacagataa 481 tgaaattttc accagaaagt gttgcagcgt ttatagcagt ccttggcatt ctttccatta 541 ttgcacagac catagtcttg agtttactta tgaggtcaat tggaaataag aacaccattt 601 tactgggtct aggatttcaa atattacagt tggcatggta tggctttggt tcagaacctt 661 ggatgatgtg ggctgctggg gcagtagcag ccatgtctag catcaccttt cctgctgtca 721 gtgcacttgt ttcacgaact gctgatgctg atcaacaggg tgtcgttcaa ggaatgataa 781 caggaattcg aggattatgc aatggtctgg gaccggccct ctatggattc attttctaca 841 tattccatgt ggaacttaaa gaactgccaa taacaggaac agacttggga acaaacacaa 901 gccctcagca ccactttgaa cagaattcca tcatccctgg ccctcccttc ctatttggag 961 cctgttcagt actgctggct ctgcttgttg ccttgtttat tccggaacat accaatttaa 1021 gcttaaggtc cagcagttgg agaaagcact gtggcagtca cagccatcct cataatacac 1081 aagcgccagg agaggccaaa gaacctttac tccaggacac aaatgtgtga cgactgaaat 1141 caggaagatt tttctatcag cacccaggtc ttagttttca cctctagttc tggatgtaca 1201 ttccatttcc atccacagtg tactttaaga ttgtcttaag aaatgtatct gcatgaactc 1261 cgtgggaact aaaggaagtg ggaacttaga accagacagt tttccaaaga tgttacaatt 1321 tcttttgaaa aaccttttgt ttattagcac caatttcttg ccactaagct atttgtttta 1381 ttatacatcc tttaattaaa aactatatat gtaacttctt agatattagc aaatgtctct 1441 gctaccattt ccttaaggtg ttgagcttta actctatgct gactcagtga gacacagtag 1501 gtagtatggt tgtggaccta tttgttttaa cattgtaaaa ttttgagtca gattttaata 1561 ttgtaaaatc ttgggtcaaa taattcaaag ccttaatgca gatgcactaa aacaaagaaa 1621 tggtaaatga attgtttgca tttaaaaaaa aaaactctta agaaaactgt actaaatctg 1681 aatcatgttt tgagcttgtt tgcagtactt ttaaacatta ttcactactg tttttgaagt 1741 gagaaagtat cagccattta gcatttaagt tggggtattt agagcctgta atctaaatgc 1801 tggctcaaat ttattcccca gctacttctt ataccactat tcttttaatg tttgcataat 1861 cataagcacc tcaacacttg aatacataat ctaaaaatta tatagtaaag ctggtagcct 1921 tgaaaatgtc agtgtgatat ctattatgta gataaatata tatagtggcc tttcaggact 1981 gtcacagtaa cactttattt acagagctaa tgtttgtcct aaattttcag gaccctagag 2041 gagagcttta tacaattacc gatgtgaatt tctctaaagt gtatattttt gtgtccagtt 2101 atattattta aaaaagtgtt actttgtaaa aattgtatat aaagtactgt atagtttaca 2161 ctgttttcat cttgtgtgtg gttattgctt aatgcttttt aaacttggaa cactcactat 2221 ggttaaataa ggtcttaaaa gaaatgtaaa tattctgtta ataaagttaa atattttaat 2281 gatttttttt ttaaaaaaaa aaaaaaaaa //