LOCUS BC064398 2577 bp mRNA linear HUM 23-DEC-2003 DEFINITION Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 1, mRNA (cDNA clone IMAGE:5530252), partial cds. ACCESSION BC064398 VERSION BC064398.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2577) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2577) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (15-DEC-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 139 Row: a Column: 2 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 25777599. FEATURES Location/Qualifiers source 1..2577 /db_xref="H-InvDB:HIT000261361" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5530252" /tissue_type="Uterus, leiomyosarcoma" /clone_lib="NIH_MGC_71" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..>2577 /gene="PSMD1" /gene_synonym="P112" /gene_synonym="S1" /db_xref="GeneID:5707" CDS 134..>2577 /gene="PSMD1" /gene_synonym="P112" /gene_synonym="S1" /codon_start=1 /product="PSMD1 protein" /protein_id="AAH64398.1" /db_xref="GeneID:5707" /translation="MITSAAGIISLLDEDEPQLKEFALHKLNAVVNDFWAEISESVDK IEVLYEDEGFRSRQFAALVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIA KCIDHYTKQCVENADLPEGEKKPIDQRLEGIVNKMFQRCLDDHKYKQAIGIALETRRL DVFEKTILESNDVPGMLAYSLKLCMSLMQNKQFRNKVLRVLVKIYMNLEKPDFINVCQ CLIFLDDPQAVSDILEKLVKEDNLLMAYQICFDLYESASQQFLSSVIQNLRTVGTPIA SVPGSTNTGTVPGSEKDSDSMETEEKTSSAFVGKTPEASPEPKDQTLKMIKILSGEMA IELHLQFLIRNNNTDLMILKNTKDAVRNSVCHTATVIANSFMHCGTTSDQFLRDNLEW LARATNWAKFTATASLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIH ANHGGDIIDYLLNQLKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVT GEAAGLALGLVMLGSKNAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADAL IESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESLGF ILFRTPEQCPSVVSLLSESYNPHVRYGAAMALGICCAGTGNKEAINLLEPMTNDPVNY VRQGALIASALIMIQQTEITCPKVNQFRQLYSKVINDKHDDVMAKFGAILAQGILDAG GHNVTISLQSRTGHTHMPSVVGVLVFTQFWFWFPLSHFLSLAYTPTCVIGLNKDLKVS TAVLSITAKAKKKKKK" misc_feature 2084..2188 /gene="PSMD1" /gene_synonym="P112" /gene_synonym="S1" /note="PC_rep; Region: Proteasome/cyclosome repeat" /db_xref="CDD:pfam01851" BASE COUNT 752 a 509 c 623 g 693 t ORIGIN 1 gtgaggaggc gactgactga gcagcgcacc cggggagcaa ggaggcgcgg tgaactgagc 61 ggcccctgag ctgacagata cactgcgcag ctggaacggc gagcgagccg acgggcgagt 121 gaggggcgca gccatgatca cctcggccgc tggaattatt tctcttctgg atgaagatga 181 accacagctt aaggaatttg cactacacaa attgaatgca gttgttaatg acttctgggc 241 agaaatttcc gagtccgtag acaaaataga ggttttatac gaagatgaag gtttccggag 301 tcggcagttt gcagccttag tggcatctaa agtattttat cacctggggg cttttgagga 361 gtctctgaat tatgctcttg gagcagggga cctcttcaat gtcaatgata actctgaata 421 tgtggaaact attatagcaa aatgcattga tcactacacc aaacaatgtg tggaaaatgc 481 agatttgcct gaaggagaaa aaaaaccaat tgaccagaga ttggaaggca tcgtaaataa 541 aatgttccag cgatgtctag atgatcacaa gtataaacag gctattggca ttgctctgga 601 gacacgaaga ctggacgtct ttgaaaagac catactggag tcgaatgatg tcccaggaat 661 gttagcttat agccttaagc tctgcatgtc tttaatgcag aataaacagt ttcggaataa 721 agtactaaga gttctagtta aaatctacat gaacttggag aaacctgatt tcatcaatgt 781 ttgtcagtgc ttaattttct tagatgatcc tcaggctgtg agtgatatct tagagaaact 841 ggtaaaggaa gacaacctcc tgatggcata tcagatttgt tttgatttgt atgaaagtgc 901 tagccagcag tttttgtcat ctgtaatcca gaatcttcga actgttggca cccctattgc 961 ttctgtgcct ggatccacta atacgggtac tgttccggga tcagagaaag acagtgactc 1021 gatggaaaca gaagaaaaga caagcagtgc atttgtagga aagacaccag aagccagtcc 1081 agagcctaag gaccagactt tgaaaatgat taaaatttta agtggtgaaa tggctattga 1141 gttacatctg cagttcttaa tacgaaacaa taatacagac ctcatgattc taaaaaacac 1201 aaaggatgca gtacggaatt ctgtatgtca tactgcaacc gttatagcaa actcttttat 1261 gcactgtggg acaaccagtg accagtttct tagagataat ttggaatggt tagccagagc 1321 cactaactgg gcaaaattta ctgctacagc cagtttgggt gtaattcata agggtcatga 1381 aaaagaagca ttacagttaa tggcaacata ccttcccaag gatacttctc caggatcagc 1441 ctatcaggaa ggtggaggtc tctatgcact aggtcttatt catgccaatc atggtggtga 1501 tataattgac tatctgctta atcagcttaa gaacgccagc aatgatatcg ttagacacgg 1561 tggcagtctg ggccttggtt tggcagccat gggaactgca cgtcaagatg tttatgattt 1621 gctaaaaaca aacctttatc aggatgatgc agtaacaggg gaagcagctg gcctggccct 1681 aggtttggtt atgttgggct ctaaaaatgc tcaggctatt gaggacatgg ttggttatgc 1741 acaagaaact caacatgaga agattctgcg tggtcttgca gttggcatag ctttagtaat 1801 gtatgggagg atggaagagg ctgatgctct cattgaatct ctctgtcgtg acaaggaccc 1861 aattcttcga aggtctggaa tgtatactgt agccatggct tattgtggct ctggtaacaa 1921 caaagcaatt cgacgcctgc tacatgttgc tgtaagtgat gttaatgatg atgtcaggag 1981 ggcagcagta gaatcacttg ggttcattct attcagaacc cctgaacagt gcccaagtgt 2041 tgtctctttg ttgtcagaga gttacaaccc tcatgtgcgc tacggagctg caatggcctt 2101 ggggatatgc tgtgctggta caggaaacaa ggaagccatt aatttgctag aaccaatgac 2161 aaacgacccc gtgaactacg tgaggcaagg ggcactcata gcttcagctc tcatcatgat 2221 ccagcagact gaaatcactt gtccaaaggt gaatcagttc agacagctgt attccaaagt 2281 catcaatgat aagcatgatg atgtcatggc caagtttggc gctattctgg cccagggcat 2341 actggatgca ggtggtcata atgtcacaat ctccttgcag tccaggactg ggcatactca 2401 tatgccttct gtggttggcg tccttgtatt tacccagttt tggttctggt ttcctctttc 2461 acacttcctg tcattggctt atacccctac ctgtgtcatt ggccttaaca aggacttaaa 2521 ggtttctact gctgtattat ctataactgc caaggctaaa aaaaaaaaaa aaaaaaa //