LOCUS BC064391 2700 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens coiled-coil domain containing 6, mRNA (cDNA clone
MGC:75097 IMAGE:5745698), complete cds.
ACCESSION BC064391
VERSION BC064391.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2700)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2700)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 139 Row: k Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 46852389.
FEATURES Location/Qualifiers
source 1..2700
/db_xref="H-InvDB:HIT000261354"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:75097 IMAGE:5745698"
/tissue_type="Blood, adult leukocytes"
/clone_lib="NIH_MGC_118"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2700
/gene="CCDC6"
/gene_synonym="H4"
/gene_synonym="PTC"
/gene_synonym="TPC"
/db_xref="GeneID:8030"
/db_xref="HGNC:HGNC:18782"
/db_xref="MIM:601985"
CDS 59..1483
/gene="CCDC6"
/gene_synonym="H4"
/gene_synonym="PTC"
/gene_synonym="TPC"
/codon_start=1
/product="coiled-coil domain containing 6"
/protein_id="AAH64391.1"
/db_xref="GeneID:8030"
/db_xref="HGNC:HGNC:18782"
/db_xref="MIM:601985"
/translation="MADSASESDTDGAGGNSSSSAAMQSSCSSTSGGGGGGGGGGGGG
KSGGIVISPFRLEELTNRLASLQQENKVLKIELETYKLKCKALQEENRDLRKASVTIQ
ARAEQEEEFISNTLFKKIQALQKEKETLAVNYEKEEEFLTNELSRKLMQLQHEKAELE
QHLEQEQEFQVNKLMKKIKKLENDTISKQLTLEQLRREKIDLENTLEQEQEALVNRLW
KRMDKLEAEKRILQEKLDQPVSAPPSPRDISMEIDSPENMMRHIRFLKNEVERLKKQL
RAAQLQHSEKMAQYLEEERHMREENLRLQRKLQREMERREALCRQLSESESSLEMDDE
RYFNEMSAQGLRPRTVSSPIPYTPSPSSSRPISPGLSYASHTVGFTPPTSLTRAGMSY
YNSPGLHVQHMGTSHGITRPSPRRSNSPDKFKRPTPPPSPNTQTPVQPPPPPPPPPMQ
PTVPSAATSQPTPSQHSAHTSSQP"
BASE COUNT 814 a 623 c 586 g 677 t
ORIGIN
1 gccttcgtcg ccgccgcctc cctgctgctc ctcctccttt ccccagcccg ccgcggccat
61 ggcggacagc gccagcgaga gcgacacgga cggggcgggg ggcaacagca gcagctcggc
121 cgccatgcag tcgtcctgct cgtcgacctc gggcggcggc ggtggcggcg ggggaggcgg
181 cggcggtggg aagtcggggg gcattgtcat ctcgccgttc cgcctggagg agctcaccaa
241 ccgcctggcc tcgctgcagc aagagaacaa ggtgctgaag atagagctgg agacctacaa
301 actgaagtgc aaggcactgc aggaggagaa ccgcgacctg cgcaaagcca gcgttaccat
361 ccaagccagg gctgagcagg aagaagaatt cattagtaac actttattca agaaaattca
421 ggctttgcag aaggagaaag aaacccttgc tgtaaattat gagaaagaag aagaattcct
481 cactaatgag ctctccagaa aattgatgca gttgcagcat gagaaagccg aactagaaca
541 gcatcttgaa caagagcagg aatttcaggt caacaaactg atgaagaaaa ttaaaaaact
601 ggagaatgac accatttcta agcaacttac attagaacag ttgagacggg agaagattga
661 ccttgaaaat acattggaac aagaacaaga agcactagtt aatcgcctct ggaaaaggat
721 ggataagctt gaagctgaaa agcgaatcct gcaggaaaaa ttagaccagc ccgtctctgc
781 tccaccatcg cctagagata tctccatgga gattgattct ccagaaaata tgatgcgtca
841 catcaggttt ttaaagaatg aagtggaacg gctgaagaag caactgagag ctgctcagtt
901 acagcattca gagaaaatgg cacagtatct ggaggaggaa cgtcacatga gagaagagaa
961 cttgaggctc cagaggaagc tgcagaggga gatggagaga agagaagccc tctgtcgaca
1021 gctctccgag agtgagtcca gcttagaaat ggacgacgaa aggtatttta atgagatgtc
1081 tgcacaagga ttaagacctc gcactgtgtc cagcccgatc ccttacacac cttctccgag
1141 ttcaagcagg cctatatcac ctggtctatc atatgcaagt cacacggttg gtttcacgcc
1201 accaacttca ctgactagag ctggaatgtc ttattacaat tccccgggtc ttcacgtgca
1261 gcacatggga acatcccatg gtatcacaag gccttcacca cggagaagca acagtcctga
1321 caaattcaaa cggcccacgc cgcctccatc tcccaacaca cagaccccag tccagccacc
1381 tccacctcca cctccgccac ccatgcagcc cacggtcccc tcagcagcca cctcgcagcc
1441 tactccttcg caacattcgg cgcacacctc ctcccagcct taatgcatga gcttagtctg
1501 aatttcaagt tgggactcat ccaatggagc cgtctactca acgccaaagg cttccttctc
1561 tggcatattt ggatatgact tatttgcact gaggttatct aggcttcact atccattgtg
1621 ttgtaaatgt ttgtcagaaa tgcagccagt gttgtgggtc tacaacacta accagacgac
1681 tttttccatc agtgttttac ttgaatcttc atgtacgtcc attccctggc tggaaccttc
1741 gctgtttggt atttggtatt tcagcagcag tgtgcaattt ttgcttggcc cagagcttca
1801 ttctcctggc ttttaggttt gtaaaagaaa aagggatatc ttttttatat ttttttccat
1861 gaatctgcag aaaattactg agctgttgtt accctcctct cattataata gtgtttacca
1921 aacataccaa taattcagca ctacaattca gacctttgaa aatctggctt tcagtgtaga
1981 acagaaagtt agatgaatca gtgcccaaga catattttct gtttaacaga actttctaca
2041 gatacatttt ttacaggtta ttttcattgt gttattgaca tccatgtctc tcgtaaaaca
2101 gatggcccaa agtaatgaat catgtggctg taccttctcc acataaatgg gatggataat
2161 tatcgtatat taagatgtga ttctcttttt tatccttaat gttaatctac ttaacctggc
2221 cccctctaac atgagtcgat aaatgttgtc ctactcaccg gtggtttcaa tggctaatta
2281 gaatgtgtta tttgatttct gctgcagaag gcagtgtgat tgtaacaaaa acaatgcggc
2341 ttcccccttt cgtacttcat ttgtgttctc ttaaaataga gtttgaacaa atattttaaa
2401 ggtgcaaaat accattagaa aatactattt gaaatggaca ttatcgcatt atcttggcat
2461 aatggccaga aaatattgta ttgcttggca gaaaagaaaa taaggtctaa aggaaagtag
2521 cacattagca ttgatggctg ttcatttcac ccagtataag caagtgcagt gtacaaagaa
2581 gtatattctg aatacattat ttccattcat ttagcacaaa taaatcattt ggtttcactt
2641 tgcagtggaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//