LOCUS BC064384 3880 bp mRNA linear HUM 09-MAR-2007
DEFINITION Homo sapiens ATP-binding cassette, sub-family B (MDR/TAP), member
9, mRNA (cDNA clone MGC:74955 IMAGE:5744451), complete cds.
ACCESSION BC064384
VERSION BC064384.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3880)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3880)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 139 Row: k Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 45243523.
FEATURES Location/Qualifiers
source 1..3880
/db_xref="H-InvDB:HIT000261347"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:74955 IMAGE:5744451"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3880
/gene="ABCB9"
/gene_synonym="EST122234"
/gene_synonym="TAPL"
/db_xref="GeneID:23457"
/db_xref="HGNC:HGNC:50"
/db_xref="MIM:605453"
CDS 579..2888
/gene="ABCB9"
/gene_synonym="EST122234"
/gene_synonym="TAPL"
/codon_start=1
/product="ABCB9 protein"
/protein_id="AAH64384.1"
/db_xref="GeneID:23457"
/db_xref="HGNC:HGNC:50"
/db_xref="MIM:605453"
/translation="MRLWKAVVVTLAFMSVDICVTTAIYVFSHLDRSLLEDIRHFNIF
DSVLDLWAACLYRSCLLLGATIGVAKNSALGPRRLRASWLVITLVCLFVGIYAMVKLL
LFSEVRRPIRDPWFWALFVWTYISLGASFLLWWLLSTVRPGTQALEPGAATEAEGFPG
SGRPPPEQASGATLQKLLSYTKPDVAFLVAASFFLIVAALGETFLPYYTGRAIDGIVI
QKSMDQFSTAVVIVCLLAIGSSFAAGIRGGIFTLIFARLNIRLRNCLFRSLVSQETSF
FDENRTGDLISRLTSDTTMVSDLVSQNINVFLRNTVKVTGVVVFMFSLSWQLSLVTFM
GFPIIMMVSNIYGKYYKRLSKEVQNALARASNTAEETISAMKTVRSFANEEEEAEVYL
RKLQQVYKLNRKEAAAYMYYVWGSGLTLLVVQVSILYYGGHLVISGQMTSGNLIAFII
YEFVLGDCMESVGSVYSGLMQGVGAAEKVFEFIDRQPTMVHDGSLAPDHLEGRVDFEN
VTFTYRTRPHTQVLQNVSFSLSPGKVTALVGPSGSGKSSCVNILENFYPLEGGRVLLD
GKPISAYDHKYLHRVISLVSQEPVLFARSITDNISYGLPTVPFEMVVEAAQKANAHGF
IMELQDGYSTETGEKGAQLSGGQKQRVAMARALVRNPPVLILDEATSALDAESEYLSP
QIQQAIHGNLQKHTVLIIAHRLSTVEHAHLIVVLDKGRVVQQGTHQQLLAQGGLYAKL
VQRQMLGLQPAADFTAGHNEPVANGSHKA"
BASE COUNT 778 a 1226 c 1115 g 761 t
ORIGIN
1 cacgccccca accgcgggag gcgcggaacc agcggccaag gggccgctct aagttcccaa
61 gggcggaaaa ggacgaagac gcacctcgcc aggaaacggt ctgcggagaa agatgctcct
121 gggccgggtt gggaccggcg gcctcctcgt tccgcctccc agttttccca ctacgaggca
181 gggactaatg gctccacttt acagacagct gaactgggtc gtgccttcac aggacgggga
241 gaggaaggga ctcggagccc caaggccttt gacttaaacg ccgacccacc ccccgccgtc
301 tgcccggagc tcgtggagaa ccagccgagc tgaggacagt ttaaagagct cggaggtccg
361 actagttccc gctggtgctt caatcatcca gccctgtacg tttcagtttg gatttagcat
421 ctaccccggg tccctgcctg gcgcttccgg tccctccgcc acagtctgtt ggattacctc
481 agattgcccc agcctggcct cgccctgtgg atgatgatgg ccttgccccc gtgagctaca
541 acctggcctt cagcacccgc ccacctccaa ccagcaggat gcggctgtgg aaggcggtgg
601 tggtgacttt ggccttcatg agtgtggaca tctgcgtgac cacggccatc tatgtcttca
661 gccacctgga ccgcagcctc ctggaggaca tccgccactt caacatcttt gactcggtgc
721 tggatctctg ggcagcctgc ctgtaccgca gctgcctgct gctgggagcc accattggtg
781 tggccaagaa cagtgcgctg gggccccggc ggctgcgggc ctcgtggctg gtcatcaccc
841 tcgtgtgcct cttcgtgggc atctatgcca tggtgaagct gctgctcttc tcagaggtgc
901 gcaggcccat ccgggacccc tggttttggg ccctgttcgt gtggacgtac atttcactcg
961 gcgcatcctt cctgctctgg tggctgctgt ccaccgtgcg gccaggcacc caggccctgg
1021 agccaggggc ggccaccgag gctgagggct tccctgggag cggccggcca ccgcccgagc
1081 aggcgtctgg ggccacgctg cagaagctgc tctcctacac caagcccgac gtggccttcc
1141 tcgtggccgc ctccttcttc ctcatcgtgg cagctctggg agagaccttc ctgccctact
1201 acacgggccg cgccattgat ggcatcgtca tccagaaaag catggatcag ttcagcacgg
1261 ctgtcgtcat cgtgtgcctg ctggccattg gcagctcatt tgccgcaggt attcggggcg
1321 gcatttttac cctcatattt gccagactga acattcgcct tcgaaactgt ctcttccgct
1381 cactggtgtc ccaggagaca agcttctttg atgagaaccg cacaggggac ctcatctccc
1441 gcctgacctc ggacaccacc atggtcagcg acctggtctc ccagaacatc aatgtcttcc
1501 tgcggaacac agtcaaggtc acgggcgtgg tggtcttcat gttcagcctc tcatggcagc
1561 tctccttggt caccttcatg ggcttcccca tcatcatgat ggtgtccaac atctacggca
1621 agtactacaa gaggctctcc aaagaggtcc agaatgccct ggccagagcg agcaacacgg
1681 cggaggagac catcagtgcc atgaagactg tccggagctt cgccaatgag gaggaggagg
1741 cagaggtgta cctgcggaag ctgcagcagg tgtacaagct gaacaggaag gaggcagctg
1801 cctacatgta ctacgtctgg ggcagcgggc tcacactgct ggtggtccag gtcagcatcc
1861 tctactacgg gggccacctt gtcatctcag gccagatgac cagcggcaac ctcatcgcct
1921 tcatcatcta cgagtttgtc ctgggagatt gtatggagtc cgtgggctcc gtctacagtg
1981 gcctgatgca gggagtgggg gctgctgaga aggtgttcga gttcatcgac cggcagccga
2041 ccatggtgca cgatggcagc ttggcccccg accacctgga gggccgggtg gactttgaga
2101 atgtgacctt cacctaccgc actcggcccc acacccaggt cctgcagaat gtctccttca
2161 gcctgtcccc cggcaaggtg acggccctgg tggggccctc gggcagtggg aagagctcct
2221 gtgtcaacat cctggagaac ttctaccccc tggagggggg ccgggtgctg ctggacggca
2281 agcccatcag cgcctacgac cacaagtact tgcaccgtgt gatctccctg gtgagccagg
2341 agcccgtgct gttcgcccgc tccatcacgg ataacatctc ctacggcctg cccactgtgc
2401 ctttcgagat ggtggtggag gccgcacaga aggccaatgc ccacggcttc atcatggaac
2461 tccaggacgg ctacagcaca gagacagggg agaagggcgc ccagctgtca ggtggccaga
2521 agcagcgggt ggccatggcc cgggctctgg tgcggaaccc cccagtcctc atcctggatg
2581 aagccaccag cgctttggat gccgagagcg agtatctgtc cccgcagatc cagcaggcca
2641 tccatggcaa cctgcagaag cacacggtac tcatcatcgc gcaccggctg agcaccgtgg
2701 agcacgcgca cctcattgtg gtgctggaca agggccgcgt agtgcagcag ggcacccacc
2761 agcagctgct ggcccagggc ggcctctacg ccaagctggt gcagcggcag atgctggggc
2821 ttcagcccgc cgcagacttc acagctggcc acaacgagcc tgtagccaac ggcagtcaca
2881 aggcctgatg gggggcccct gcttctcccg gtggggcaga ggacccggtg cctgcctggc
2941 agatgtgccc acggaggccc ccagctgccc tccgagccca ggcctgcagc actgaaagac
3001 gacctgccat gtcccatgga tcaccgcttc ctgcatcttg cccctggtcc ctgccccatt
3061 cccagggcac tccttacccc tgctgccctg agccaacgcc ttcacggacc tccctagcct
3121 cctaagcaaa ggtagagctg cctttttaaa cctaggtctt accagggttt ttactgtttg
3181 gtttgaggca ccccagtcaa ctcctagatt tcaaaaacct ttttctaatt gggagtaatg
3241 gcgggcactt tcaccaagat gttctagaaa cttctgagcc aggagtgaat ggcccttcct
3301 tagtagcctg ggggatgtcc agagactagg cctctcccct ttacccctcc agagaagggg
3361 cttccctgtc ccggagggag acacggggaa cgggattttc cgtctctccc tcttgccagc
3421 tctgtgagtc tggccagggc gggtagggag cgtggagggc atctgtctgc catcgcccgc
3481 tgccaatcta agccagtctc actgtgaacc acacgaaacc tcaactgggg gagtgagggg
3541 ctggccaggt ctggaggggc ctcaggggtg cccccagccc ggcacccagc gctttcgccc
3601 ctcgtccacc cacccctggc tggcagcctc cctccccaca cccgcccctg tgctctgctg
3661 tctggaggcc acgtggatgt tcatgagatg cattctcttc tgtctttggt ggatgggatg
3721 gtggcaaagc ccaggatctg gctttgccag aggttgcaac atgttgagag aacccggtca
3781 ataaagtgta ctacctctta aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
3841 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//