LOCUS BC064145 1741 bp mRNA linear HUM 03-JAN-2005 DEFINITION Homo sapiens CDK5 regulatory subunit associated protein 1-like 1, mRNA (cDNA clone IMAGE:30379056), complete cds. ACCESSION BC064145 VERSION BC064145.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1741) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1741) AUTHORS Director MGC Project. TITLE Direct Submission JOURNAL Submitted (11-DEC-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Dr. Michael Brownstein cDNA Library Preparation: Invitrogen Corp cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield, Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin, Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu, Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 141 Row: m Column: 13 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 8923317 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..1741 /db_xref="H-InvDB:HIT000261287" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:30379056" /tissue_type="Testis" /clone_lib="NIH_MGC_180" /lab_host="DH10B" /note="Vector: pCMV-SPORT6.1" gene 1..1741 /gene="CDKAL1" /gene_synonym="FLJ20342" /db_xref="GeneID:54901" CDS 257..550 /gene="CDKAL1" /gene_synonym="FLJ20342" /codon_start=1 /product="CDKAL1 protein" /protein_id="AAH64145.1" /db_xref="GeneID:54901" /translation="MPSASCDTLLDDIEDIVSQEDSKPQDRHFVRKDVVPKVRRRNTQ KYLQEEENSPPSDSTIPGIQKIWIRTWGCSHNNSDGEYMAGQLAAYGYKITGE" BASE COUNT 557 a 283 c 340 g 561 t ORIGIN 1 gtcatggcgc tctccatcta aagtctgtgc agcttccgga gagtggcggg ttgattttct 61 cactttggac tggtttttac ttcccgactt ctggtggttg gttactcgca ctatgcagac 121 gtgttgcggt gctgaataca acatttatta ctaaagccag acactggatc accgtcacgg 181 cagatgtcag cacacctgtt gtaatcaact catctttcaa gaggacttta gactaattgc 241 agataattaa gagaatatgc cttctgcatc ctgtgataca ctactggatg acatcgaaga 301 tatcgtgtct caggaagatt caaaaccaca agataggcat tttgtaagaa aggatgttgt 361 cccgaaggta cgaaggcgaa atacccaaaa atatttgcaa gaggaagaaa acagtccacc 421 aagtgacagc actattccag gcatacagaa aatttggata cgaacatggg gttgttctca 481 taataattca gatggagaat atatggctgg acagctagct gcttatggct ataaaattac 541 aggtgaatga aatttgggaa tcctatactt ggaattctgg aatggctagc ctgggccagg 601 aaaaatcact ttgtaatcta agaaggaatt gagttaagaa gatttgttca tcacaccaca 661 tttccatgtt gttgaggaaa atagattggc agtggtgaca aggtcaagga tgtgttgttc 721 gaagttgtag aagataagca gcaatttaaa ggcgttacaa tacattttta agagtggaaa 781 ttgcattgaa gagtggaaga aaagtcgaca taagagaatt agggcatgtt gtttgcccag 841 gctggtcttg aactcctgag ctcaaccaat ccacctgcct cggcctccca aagtgctggg 901 attacaggcg tgagccaccg tggctggccc ttaatatgtt ttaaaaggat gtttaatact 961 cttcattact gtgttatgca atagttgcat gatgattttt ctgatctcta cattctattt 1021 tttttctttt taaaatggag cacagaagta cttagtttct gatgtttttc catcttggcc 1081 cagtaatttc cttttttttt gttattttat gaagcacaaa actaaatatt tttgaaccaa 1141 gagactactg tgtggtatta attttgattt tgtactaaat tcatgttatt tacacaaatc 1201 aaatagtgtc aaccttaaaa tttttttaag caatattttt cttatgtttg agagttaaca 1261 tgtatggttg attagaatct tcaccttcta aagggattaa ggaaaaacct cgttcactgt 1321 tgtgaattct aaaatgtttt ggttccaagt cctagttttt cttaccctgg tattatgtcc 1381 aaaatgaatg cccactaaaa gttagtaact ctcatggcaa ttaaagtatt ttgataatgt 1441 ttataagttc ttgttctcaa ttttgccact agtaaagatg tgggagaagt taatcttttt 1501 ttgttgtctt tcttgtgaac ttaaagatca tttttcatcc tgttcaacct ttggcctgac 1561 cttttcaggt cactaaatgt ctggtttgca cttcttgtag catgtgagaa ataatacttc 1621 aaaattcaag tgtaattgta ttaatttttg tgaataaact gctatggagt gctaaaaaaa 1681 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 1741 a //