LOCUS BC064142 1760 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome 1 open reading frame 177, mRNA (cDNA clone
MGC:75422 IMAGE:30390069), complete cds.
ACCESSION BC064142
VERSION BC064142.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1760)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1760)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Michael Brownstein
cDNA Library Preparation: Invitrogen Corp
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 141 Row: o Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22749242.
FEATURES Location/Qualifiers
source 1..1760
/db_xref="H-InvDB:HIT000261284"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:75422 IMAGE:30390069"
/tissue_type="Testis"
/clone_lib="NIH_MGC_180"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6.1"
gene 1..1760
/gene="C1orf177"
/gene_synonym="FLJ40201"
/db_xref="GeneID:163747"
/db_xref="HGNC:HGNC:26854"
CDS 17..1261
/gene="C1orf177"
/gene_synonym="FLJ40201"
/codon_start=1
/product="chromosome 1 open reading frame 177"
/protein_id="AAH64142.1"
/db_xref="GeneID:163747"
/db_xref="HGNC:HGNC:26854"
/translation="MRESQDAAGAHGWNRVGSTATKWFTGAPFGVQSHRFDISAVYPN
WKKFSTFTEAPYSTRYSTQVSHIGPGTYSSKETCFSKKKLMKEVDTGWAKAQEATRLT
QLPHFQYQAIMKEKRLKEQKLGPCSYNLKDFLEQLREKPCSTRGLLSSGEVRFRGLTG
NYYPGPGNYGEKGNPYTKLEENAWNRSHSEGLMCRMSNKPHPRPHQGSGLGPGTYFFK
SDLETYVARSVGTRGPYDTFSGDRSKPLPYGHYSMQKKKPRELMNFKSFVEELNSHHN
KKHGVFSKLPRNPKTPTERIYWANLSQCPRTLATSGPSFWLPQEKKCKPVNQPPFLLT
SKGSGAKACQMIMGSWNPVGVGRYLNTWLMETKDRRQRYRSLFLSGSKRYLSDLARDM
LMQIRLFCWKGLEVINFGLSPM"
BASE COUNT 473 a 469 c 480 g 338 t
ORIGIN
1 ggcgcgcagg cctgccatga gggaaagcca ggatgccgcc ggagctcatg gctggaaccg
61 cgtcggctcc acggccacca agtggttcac cggggcgccc ttcggggtgc agagccacag
121 gtttgacatc tctgctgttt atcccaactg gaagaagttc agcaccttca ctgaggcccc
181 atactccacg cgttattcta cccaagtgtc ccacataggc cctgggactt acagctccaa
241 agagacctgc ttcagcaaga agaagctgat gaaggaggtg gacacaggct gggccaaggc
301 ccaggaagcc acgcggctga cccagctacc ccacttccag taccaggcca tcatgaaaga
361 gaagcggctg aaggagcaaa agctgggccc ctgctcctac aacctcaaag acttcttaga
421 acagctgcgg gagaaaccat gtagcacccg ggggctgctc agctctgggg aggttcgctt
481 ccgaggactc actgggaact actatccagg ccctggaaat tatggggaga agggtaaccc
541 atacaccaag ctggaggaga atgcctggaa ccggtctcat tccgagggcc tcatgtgcag
601 gatgagcaac aagccacacc cccggcctca tcaggggagt ggtctgggac ccggcaccta
661 cttcttcaaa agcgaccttg agacatatgt ggcacgatcc gtcggcaccc gcggccccta
721 tgacactttc tctggtgatc ggagcaagcc actgccttat gggcactact ccatgcagaa
781 aaaaaagccc agggaactga tgaatttcaa gagctttgta gaagaactta actcacatca
841 caataagaag catggggttt tttctaaact tccccgaaac ccgaaaaccc ctacagagag
901 gatttactgg gccaacctca gccagtgccc ccgcacactg gccacatctg gccccagttt
961 ctggcttcca caagagaaga aatgcaaacc cgtcaaccag cccccattcc tgttgacctc
1021 caaggggtca ggtgcaaagg cctgccagat gattatggga agctggaacc cagtaggtgt
1081 gggccgctac ctcaacacct ggctgatgga gacaaaggac aggcggcagc gatatcgatc
1141 cctattcctg agtggatcca aacgctacct ctcagacctg gcccgggaca tgctcatgca
1201 aatcaggctg ttttgttgga aaggcctaga agtcatcaat tttggcctct caccaatgta
1261 ggatctcctg tgaagcagaa ccaacaggga aaggatcaca ccatttacta agggaaagtg
1321 ccctccaact gtggattaca attcagatcc tactccttaa agccacatgc gaaggacagc
1381 ctgcagtgac cagagagccc aaaggcctga agacaaatct gggggtgaca gcatgggcat
1441 gggagtgggg tgtcttagag aaaggacaca tgggcttggg agaggggaga gatgtatggg
1501 gatcaccttt gccagagctg catacctgaa ggtcacagtg tcttccggga cagctgggga
1561 caggtatctt ttgttgcagg agatcaatta tcctgagaac tcaactcagc cagtgacatg
1621 aacatggggg ccagagagca gatggactga agggatggga cgtagttgac acttgtggga
1681 ccctttctat tctaaagcca gagtgcttgg ctccttgttt attaaagttc agaaagtggt
1741 gggaaaaaaa aaaaaaaaaa
//