LOCUS BC063866 2333 bp mRNA linear HUM 30-MAR-2005
DEFINITION Homo sapiens similar to matrilin 2 precursor, mRNA (cDNA clone
IMAGE:6183232).
ACCESSION BC063866
VERSION BC063866.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2333)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2333)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. James R. Lupski
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield,
Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin,
Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu,
Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska,
Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie
Schein, Asim Siddiqui, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 141 Row: c Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..2333
/db_xref="H-InvDB:HIT000261242"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6183232"
/tissue_type="Peripheral Nervous System, dorsal root
ganglion"
/clone_lib="Lupski_dorsal_root_ganglion"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 691 a 492 c 444 g 706 t
ORIGIN
1 tttgattcct atctcgttca aatttttggt tcatcgtcac ctcaacctgg atttgggatg
61 tcaggggaag aactcagtga atctactcca gagcctcaaa aagaaatttc tgagtcattg
121 agtgtcacca gagaccagga tgaagatgat aaggctccag agccaacgtg ggctgatgat
181 ctgcctgcca ctacctcatc tgaggccacc accaccccca ggccactgct cagcacccct
241 gtggatgggg cagaggatcc tagatgtttg gaagccttga agcctggaaa ctgtggtgaa
301 tatgtggttc gatggtatta tgacaaacag gtcaactctt gtgcccgatt ttggttcagt
361 ggctgtaatg gctcaggaaa tagattcaac agtgaaaagg aatgtcaaga aacctgcatt
421 caaggatgag caagtaaatt ggcctgtctc tatcaaaagc atagaactcc ctaatttcca
481 catattcacc caatacaaat acagcactat atttgagtgt atactgagta tttacaactt
541 atacatgtaa ttgaattctc actacagccc taggatgtac atattattaa ccacttatat
601 aggtaagaaa gctgaggctc tgagaagttt agtaacttgt caactgtcac ccaactaaaa
661 agtttcagag ctgaggattt agacttagag ctgtgtaact tcaatacaca gactctatct
721 acttcacaac ctgcaatgtg attctgattc ctttaattcc tgttgtatgt actatgtcag
781 ctcaaacccc tacccctgtc cctgcccata cctccaccca ctcacctccc taacctcctt
841 atgtccctca cagtagcaag atgtaggtga taggaaggac ttcggtgtga gaattagaaa
901 tgatgtaaat gtttacgcag gagtgctggg ataggagtcg ggatggtgag ggtagttaga
961 tttttgcctc acttgccctg aaagtggtaa tagggagaaa ccaatctgaa ttacaattac
1021 ttaaatgtat cacagactgt cactttgtat tcctccaaca tgtttggtaa caagtgttta
1081 atgtatgtta aaacaaagaa ggtttttata cccttccatt aaaatatgtc agtgggccct
1141 tccattttat ggagtggaat gggaaggccc ttgacagcca ggaaccactt gaagttggca
1201 tccactcttg aacagtgtgt attaaagaca ggattcacac tgaaaagtga gccaccaaat
1261 tgaaatgcga gtaatggaga gtaacggaga attgactctg tcattttata atacttttgc
1321 aagatcctgt ctgggaagag cattagttct gagctgagtt cagacagcac ttgcatattt
1381 ctttcttttt tttttttttc ccccagacag agtcttgctc tgcactccag cctgggtgac
1441 acagcaagac tctgtctcaa aacaaaaaca aaaacaaaaa acaaaatact ttctccttct
1501 atcaggtcta ccctcattca attcaacagt gcaaaaaaga gcactcacgg aagaaggaga
1561 tggaagaata gccatcttgg cagaaataat gatatgtata atttttttat ttaattaaaa
1621 ttgtattatg taatatttga tactacaaaa gataatgcaa catgtttgtc aatttttttt
1681 attatacttt aagttttagg gtacatgtgc acaaagtaca gatttgttac atatgtattc
1741 atgtgccatg ttggtgtgct gcacccatta actcgtcatt taacattagg tatatttcct
1801 aatgctatcc ctccccactc ccccgccacc ccacaacagg ccctggtgtg tgatgttccc
1861 cttcctgtgt ccatgtgttc tcattgttca actcccacct atgagtgaga acatgcggtg
1921 tttggttttt tgtccttgtg acagtttgct gagaatgatg gtttccagct tcatccatgc
1981 ccctacaaag gacatgaact catcattttt tatggctgca tagtattctg tggtgtatat
2041 gtaacatgct tgtcaattta aaaacatgat aagatgaaca ccagtgaaca catcacctag
2101 agaatgaagc aaacatcaaa aattctattg cagcttcccg tgtggccctc cgccatccca
2161 gctctctatt ccatgccagg gatatcccat tttgaacttc gtatttacca tgtcaatgtg
2221 ctgttgacat ttataggtaa ttttacatgt aaaactctat atatctctat gtgttgccaa
2281 acaataaata tttagccttg cttattttac agttttaaaa aaaaaaaaaa aaa
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