LOCUS BC063865 2875 bp mRNA linear HUM 09-DEC-2003
DEFINITION Homo sapiens cDNA clone IMAGE:6182981, partial cds.
ACCESSION BC063865
VERSION BC063865.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2875)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2875)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (08-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. James R. Lupski
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield,
Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin,
Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo
Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven
Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline
Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott,
Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy,
George Yang, Scott Zuyderduyn, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 141 Row: c Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..2875
/db_xref="H-InvDB:HIT000261241"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6182981"
/tissue_type="Peripheral Nervous System, dorsal root
ganglion"
/clone_lib="Lupski_dorsal_root_ganglion"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 802 a 662 c 528 g 883 t
ORIGIN
1 gctgggaggc gtgagccact ggcctagaac cgtattttga ctgtgccttt tatatgttta
61 gctatgctta gatacctgaa tacttaccac tgtgttgcag cggcctacag tattcggcac
121 agtcccatac cgtgcaggtt tgccaccggg gagcagtagg ctatgctgtc tagccggggt
181 ggagtaggct ctaccatcta agtttgtgaa gtacatgctg atattcccac aacagcaatg
241 catttttcag aacctatccc cgccgttaag caatgtgtga cagcacttca actcctctgg
301 cctgtttgct cttctataaa atgcccacct cacagggggt tgtaaggatt aaacaagaca
361 accaggacct ggcatttggt cggtgctcag caaatactgg gttcctctcc tcccctgtca
421 cctgggcttc aggtttcctg agcttatctg caaacctgtg ctgaacaaac agagctacag
481 cctgagtggc taaaaaaaca tgaagagagg acaagaatgt gatgtgtggg aggcagagga
541 aagggtcatg gccacgcaaa actctactca gaattgcaag ggggttcctc tgctgcccct
601 tcgagccccc acactgaaac tggcttttct gctattttta agatttgtta agtcaggcct
661 gctttgcatg ggagctccac ctccacaata gccactttct ccttgggatc tgacttggat
721 ccccacctca gcattgtcaa aggccccgtg gagcctctga agctctccct cctgtggcct
781 tttgagtcta gtgcctgtgc tgtgcatggc tcatcaagct ccataagtat ttgtgaaatc
841 aaaatgtctc cttcttgccc aacacacacc catggctcct cacagcccaa ctcccctgct
901 gtaacccatc agccaatcca gtcacattag acctcttgca tcccctgaaa aaactctatg
961 cctttccttt gcctaaaatg cccttctccc ccttcaccca ctgtctcatt cctcaggacc
1021 cttctcaaaa gtcactccat caaaaagcct ttcagattcc agcaaacaca agggaacttc
1081 cgcttatccc cattcctcaa atcactttga ttgtgaatta attaattaat ttatttattt
1141 atttatttat tttgagacgg agtcttactc tgctgctcag gctggagtgc agtggcgtga
1201 tctcagctca ctgcaacctc cacctctagg gttcaacagc taattattgt atttttggta
1261 gagatgggat ttcaccatgt tgcccagtct ggtctcgaac ttctgacctc aggtgatcca
1321 gccaccttgg cctcccaaag tgctgggatt acaggcatga gccaccacac ccagcctgaa
1381 aatttttaag tttttaacct tagcagctaa cagcagagtt ctttaaaagg tatttaacat
1441 ctgtttttgg aagatatgtt aatgaaattg gataactggg tttcctgggc acgtcaaacc
1501 atagtcatca acataatgta ccctaccttc tcatcaaagt cctaataaga caagctttcg
1561 tttctttatg acagaaccac cctaagcgtt taaattcctt acccagaact taagtcttaa
1621 tttaaaattt tcataaatca aattatttgg aaaaatctca atactgatta caaaataatc
1681 aaattatttt acacatttaa aaatattcga atctattatc attcaacttt tttaatattt
1741 caaaataagt cacaagatga atatcaaatc ctcttaacta tttcaaatta atatcacaat
1801 cataatatgc cagattctct aacatgacat tctccaaaat atttcagatg ccttaagaaa
1861 caaataatac atacaaatta ccatgatgat ttcagttttt ttctaaacct aatgcaaagt
1921 agtaatatca cggatttggt agacattttt cttatcacaa tgcttatttc tacaccttca
1981 cagcattttc ctatgcttac cactttaagg agatcagaat tactgtctca gtttggctgg
2041 ggctgctcag tccaaaattt ggaactgaga tgagttacag atttcagttt agttagagtt
2101 tctgaattgc atcagaacag ctgggtctac ttccagagtg gtccctcctg aggtttattt
2161 tgactcatgg ttctacaggt tgtaagggaa gcatggcacc agcatctgct tctgatgagg
2221 gcctcaggaa gcttcccatc atggcatatg gcaaagaggg agcaagcaaa tcatggtgag
2281 aaaggaagca agagtgagcg ggaggaaatg ccaggctctt ttgaacaacc ggatctcgca
2341 tgaagtcata gagtgagaac tcattcatta ctgcaggaca acaccaagtc atttgtgaag
2401 attccatccc cgtgacccaa acacctccgg gtaggcccac ctccaacact ggaggtcaca
2461 tttcaacatg agatttggag gggacaaaca tctaaaccat atcaagattt ttcatttatt
2521 tgtctaaatt gattcctatg tatttcatat ttttgtagct attgtaaatg agattgcttt
2581 cttgatttct tttttcagat tattcaccat tgacatatat aaatgctact aatttctgta
2641 tgttgagttt gtatccagca acttactgaa ttagtttacc agttctagca gttttttggt
2701 ggagtcttta ggtttttcta agtgtaagtt catgtcatct gtgaacaagg ctatgatttc
2761 tttctttcca attttagtac tctttatttt tttcccttgc ctaattgctc ttccaggact
2821 tccaatatta tgttaaataa aagtggtgaa aagtgaaaaa aaaaaaaaaa aaaaa
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