LOCUS BC063864 3011 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens F-box protein 42, mRNA (cDNA clone MGC:75362 IMAGE:6182628), complete cds. ACCESSION BC063864 VERSION BC063864.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3011) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3011) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (08-DEC-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Dr. James R. Lupski cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 141 Row: c Column: 13 This clone was selected for full length sequencing because it passed the following selection criteria: Hexamer frequency ORF analysis. FEATURES Location/Qualifiers source 1..3011 /db_xref="H-InvDB:HIT000261240" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:75362 IMAGE:6182628" /tissue_type="Peripheral Nervous System, dorsal root ganglion" /clone_lib="Lupski_dorsal_root_ganglion" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..3011 /gene="FBXO42" /gene_synonym="Fbx42" /gene_synonym="KIAA1332" /db_xref="GeneID:54455" /db_xref="HGNC:HGNC:29249" /db_xref="MIM:609109" CDS 217..2370 /gene="FBXO42" /gene_synonym="Fbx42" /gene_synonym="KIAA1332" /codon_start=1 /product="F-box protein 42" /protein_id="AAH63864.1" /db_xref="GeneID:54455" /db_xref="HGNC:HGNC:29249" /db_xref="MIM:609109" /translation="MASSSDSEDDSFMAVDQEETVLEGTMDQDEEPHPVLEAEETRHN RSMSELPEEVLEYILSFLSPYQEHKTAALVCKQWYRLIKGVAHQCYHGFMKAVQEGNI QWESRTYPYPGTPITQRFSHSACYYDANQSMYVFGGCTQSSCNAAFNDLWRLDLNSKE WIRPLASGSYPSPKAGATLVVYKDLLVLFGGWTRPSPYPLHQPERFFDEIHTYSPSKN WWNCIVTTHGPPPMAGHSSCVIDDKMIVFGGSLGSRQMSNDVWVLDLEQWAWSKPNIS GPSPHPRGGQSQIVIDDATILILGGCGGPNALFKDAWLLHMHSGPWAWQPLKVENEEH GAPELWCHPACRVGQCVVVFSQAPSGRAPLSPSLNSRPSPISATPPALVPETREYRSQ SPVRSMDEAPCVNGRWGTLRPRAQRQTPSGSREGSLSPARGDGSPILNGGSLSPGTAA VGGSSLDSPVQAISPSTPSAPEGYDLKIGLSLAPRRGSLPDQKDLRLGSIDLNWDLKP ASSSNPMDGMDNRTVGGSMRHPPEQTNGVHTPPHVASALAGAVSPGALRRSLEAIKAM SSKGPSASAALSPPLGSSPGSPGSQSLSSGETVPIPRPGPAQGDGHSLPPIARRLGHH PPQSLNVGKPLYQSMNCKPMQMYVLDIKDTKEKGRVKWKVFNSSSVVGPPETSLHTVV QGRGELIIFGGLMDKKQNVKYYPKTNALYFVRAKR" BASE COUNT 772 a 762 c 764 g 713 t ORIGIN 1 gcagcagctg cggcggcggc ggcgtttgag tggaggaaga tggcggctcc gggcggctcg 61 gggtcccgcc agctgtgagg agccccgagc acggctgtcg cggcctgagg cagagcgcct 121 ctgctctggc cctgtccctg gctccctcat taccgtcgcc agcggagcga acccgagagc 181 gtggagcggg ctgggccagc tgttgagtgg aatgtcatgg ccagctcctc agacagtgaa 241 gatgacagtt tcatggctgt ggaccaggaa gaaactgtgc tggaagggac aatggatcaa 301 gatgaggagc cccacccagt attggaggct gaggagacta gacataatag gtccatgtcg 361 gagctgccag aagaggtttt ggagtatatc ctgtcctttc tctcaccgta tcaggaacac 421 aaaactgcgg cccttgtctg caaacagtgg tatcgactta tcaaaggtgt agcccatcag 481 tgttatcatg gtttcatgaa ggctgtccag gaaggaaaca ttcagtggga gagccgtacc 541 tatccttatc ctggaacccc aatcactcag cgcttctcgc acagtgcatg ctattatgat 601 gctaatcagt ctatgtatgt gtttggaggc tgtacccaga gcagctgcaa tgctgctttc 661 aatgacctct ggagacttga cctaaacagc aaagagtgga tccgaccttt ggcttcaggg 721 tcctatcctt cccccaaagc tggagcaact ctggtcgtgt acaaggactt gctagtgctg 781 tttggtggct ggacgcggcc aagcccttat cccctacacc agccagagag attctttgat 841 gaaatacaca cttactcacc ctctaaaaat tggtggaact gcattgtgac aacccatggg 901 ccacctccca tggctggcca ctcctcctgt gtgatagatg ataaaatgat tgtctttggt 961 ggctctttag gatcccggca aatgagcaat gatgtctggg tccttgacct tgagcagtgg 1021 gcgtggtcca agccgaacat ctctggcccc agtcctcatc ctcgaggtgg ccaatctcag 1081 attgtcatag atgatgcaac tatcttaatc ctcggagggt gtggcggtcc caatgctcta 1141 ttcaaggatg cttggttgtt gcacatgcat tctggtcctt gggcctggca gccactcaag 1201 gtagaaaatg aagagcatgg ggccccagaa ctgtggtgcc atccagcttg ccgggtggga 1261 cagtgtgtgg tggtcttcag ccaggctcct agtgggagag ccccactcag ccccagtttg 1321 aactctcgcc catcacctat cagtgccact cctccagctc tcgttcctga aacccgagag 1381 taccgctctc agtctccagt aagaagcatg gatgaagctc cttgtgttaa cggccgctgg 1441 ggaacactga gacccagggc tcaaaggcag actccttcag gttcccggga agggagcctt 1501 tccccagcca gaggagacgg ctctcctatc ctcaatggtg ggagtttgtc tccaggaacg 1561 gcagctgtgg gtggctcttc tttggacagt cctgtacagg ccatatctcc aagtactcca 1621 tctgctcctg aaggatacga cctgaaaata ggactttctt tggccccccg acgaggatca 1681 ctaccagatc agaaagatct gagattagga tccatagatc tgaattggga tctgaaaccc 1741 gcttccagta gtaatcccat ggatggcatg gacaatagga cagttggggg aagtatgaga 1801 caccctcctg aacagacaaa tggtgtgcat accccacctc acgtggccag tgcccttgca 1861 ggggccgtct ccccaggtgc cctgcgtcgg agtctggaag ccatcaaagc gatgtcctcc 1921 aaaggcccct cggcctctgc agcactaagt cctcctcttg ggtcttctcc aggctctcct 1981 gggagccaga gtttgagcag tggagaaaca gtgcccatcc ctcgcccagg gcctgcccaa 2041 ggagatggac attccttacc tcccattgct cgccgcctgg gccaccaccc tccacagtcc 2101 ctaaatgttg gcaaacccct ataccagagt atgaactgca agcccatgca gatgtacgtg 2161 ctggacatta aagacaccaa ggagaagggg cgggtcaaat ggaaagtatt taatagcagt 2221 tctgtggttg gacctcctga aaccagcctg cataccgtgg tacaaggcag gggtgaactc 2281 atcatatttg gaggactcat ggacaagaaa cagaatgtga agtactatcc aaaaacaaac 2341 gccttgtact ttgtacgagc aaagagataa tgtgttctaa acccctttcc ttttctgtgg 2401 cttttaattt ggaattttcc agtgtgtaag catttggact gagaattggg aaaacaaaat 2461 tactcccaga agccaaaact ctttaattcc caaccgaagt cactccaggc tgggatcaaa 2521 tctccattaa gaaaaaaaat tatatataaa tatatatata tatattatat agccaactct 2581 gttgacaaaa aaagggagag atttccatcc tggttcagat aaagttgttg ctgtgtttta 2641 acaggggctg ggctgccttt ttctaccttg ctggtaacta gaccaagaag ttagagaata 2701 gactaacatc agtaacttcc caaaagaaac tgaagagccc cctgtaaatc tttatgtggc 2761 cttcttggag ttaaaaaatg aaagggcata tgtaagttgc aaaggtggag ggttttagac 2821 tctcatgctt caggtgctgt cggggtaaaa gtaactgttt ttccccttct cttaaaacca 2881 cagaggacct gtgacagctc tgcagaaatg ccagtgcctg gccccctctt gccttttatg 2941 gctgaggaaa gttacccaac aaaggatttt attccaaaaa aaaaaaaaaa aaaaaaaaaa 3001 aaaaaaaaaa a //