LOCUS BC063861 4021 bp mRNA linear HUM 06-APR-2004 DEFINITION Homo sapiens ankyrin repeat and IBR domain containing 1, mRNA (cDNA clone IMAGE:6469676), partial cds. ACCESSION BC063861 VERSION BC063861.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4021) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 4021) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (08-DEC-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield, Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin, Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu, Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 141 Row: h Column: 13 This clone was selected for full length sequencing because it passed the following selection criteria: GenomeScan gene prediction. FEATURES Location/Qualifiers source 1..4021 /db_xref="H-InvDB:HIT000261237" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:6469676" /tissue_type="Uterus, leiomyosarcoma" /clone_lib="NIH_MGC_71" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene <1..4021 /gene="ANKIB1" /gene_synonym="DKFZP434A0225" /gene_synonym="KIAA1386" /db_xref="GeneID:54467" CDS <1..3622 /gene="ANKIB1" /gene_synonym="DKFZP434A0225" /gene_synonym="KIAA1386" /codon_start=2 /product="ANKIB1 protein" /protein_id="AAH63861.1" /db_xref="GeneID:54467" /translation="APTQSEPRRGRLRLTQRFPRAASAHPRPHQPPPGGCTRAGEEGA TVRVGGAGWVPEVTSSAVEAGAAEAELRSCWVHRPLPSAREVTNVKDVAEVFQKWLKI EGKKCHCLSEKTKQNMGNTTTKFRKALINGDENLACQIYENNPQLKESLDPNTSYGEP YQHNTPLHYAARHGMNKILGTFLGRDGNPNKRNVHNETSMHLLCMGPQIMISEGALHP RLARPTEDDFRRADCLQMILKWKGAKLDQGEYERAAIDAVDNKKNTPLHYAAASGMKA CVELLVKHGGDLFAENENKDTPCDCAEKQHHKDLALNLESQMVFSRDPEAEEIEAEYA ALDKREPYEGLRPQDLRRLKDMLIVETADMLQAPLFTAEALLRAHDWDREKLLEAWMS NPENCCQRSGVQMPTPPPSGYNAWDTLPSPRTPRTTRSSVTSPDEISLSPGDLDTSLC DICMCSISVFEDPVDMPCGHDFCRGCWESFLNLKIQEGEAHNIFCPAYDCFQLVPVDI IESVVSKEMDKRYLQFDIKAFVENNPAIKWCPTPGCDRAVRLTKQGSNTSGSDTLSFP LLRAPAVDCGKGHLFCWECLGEAHEPCDCQTWKNWLQKITEMKPEELVGVSEAYEDAA NCLWLLTNSKPCANCKSPIQKNEGCNHMQCAKCKYDFCWICLEEWKKHSSSTGGYYRC TRYEVIQHVEEQSKEMTVEAEKKHKRFQELDRFMHYYTRFKNHEHSYQLEQRLLKTAK EKMEQLSRALKETEGGCPDTTFIEDAVHVLLKTRRILKCSYPYGFFLEPKSTKKEIFE LMQTDLEMVTEDLAQKVNRPYLRTPRHKIIKAACLVQQKRQEFLASVARGVAPADSPE APRRSFAGGTWDWEYLGFASPEEYAEFQYRRRHRQRRRGDVHSLLSNPPDPDEPSEST LDIPEGGSSSRRPGTSVVSSASMSVLHSSSLRDYTPASRSENQDSLQALSSLDEDDPN ILLAIQLSLQESGLALDEETRDFLSNEASLGAIGTSLPSRLDSVPRNTDSPRAALSSS ELLELGDSLMRLGAENDPFSTDTLSSHPLSEARSDFCPSSSDPDSAGQDPNINDNLLG NIMAWFHDMNPQSIALIPPATTEISADSQLPCIKDGSEGVKDVELVLPEDSMFEDASV SEGRGTQIEENPLEENILAGEAASQAGDSGNEAANRGDGSDVSSQTPQTSSDWLEQVH LV" misc_feature 491..943 /gene="ANKIB1" /gene_synonym="DKFZP434A0225" /gene_synonym="KIAA1386" /note="ANK; Region: ankyrin repeats" /db_xref="CDD:cd00204" misc_feature 1556..1786 /gene="ANKIB1" /gene_synonym="DKFZP434A0225" /gene_synonym="KIAA1386" /note="IBR; Region: IBR domain. The IBR (In Between Ring fingers) domain is found to occur between pairs of ring fingers (pfam00097). The function of this domain is unknown. This domain has also been called the C6HC domain and DRIL (for double RING finger linked) domain" /db_xref="CDD:pfam01485" misc_feature 1853..2029 /gene="ANKIB1" /gene_synonym="DKFZP434A0225" /gene_synonym="KIAA1386" /note="IBR; Region: In Between Ring fingers" /db_xref="CDD:smart00647" BASE COUNT 1213 a 891 c 940 g 977 t ORIGIN 1 ggcgcccacc cagtctgagc ctcgccgcgg gcgccttcgg ctcacgcagc gcttcccgcg 61 ggccgccagt gcgcaccctc ggccacatca gcctccgcct ggcgggtgca cccgggccgg 121 cgaggaaggg gcaaccgtcc gggtgggtgg ggcgggctgg gtacctgagg tcaccagctc 181 ggctgtagag gcaggggcgg cggaggcgga actgcggagt tgctgggtcc accgaccctt 241 accctcagcg agagaagtaa ccaatgtgaa agatgttgca gaagtgttcc agaagtggct 301 gaagatagaa ggaaaaaagt gccactgcct atcagaaaaa acaaaacaaa acatgggaaa 361 tacaaccacc aaattccgta aagcactcat caatggtgat gaaaacctgg cctgccaaat 421 atatgaaaac aatcctcagc taaaagaatc tcttgatcca aatacatctt atggggagcc 481 ctaccagcac aatactccat tacattatgc tgctagacat ggaatgaata aaatattagg 541 gacttttctt ggtagagatg gaaatccaaa taaacggaat gtgcacaatg aaacatctat 601 gcatttgttg tgtatgggac ctcaaattat gatatctgaa ggagcccttc atcctcgctt 661 ggcacgcccc acagaagatg atttcagaag agcagattgt ctgcagatga tcttaaaatg 721 gaaaggagca aaacttgacc agggtgaata tgagagagca gctattgatg ctgttgataa 781 caaaaaaaac acacccttgc actatgctgc tgcctcaggg atgaaagcct gtgtagagct 841 tttagtaaaa catggaggag acttgtttgc tgagaatgaa aataaagata ctccttgtga 901 ttgtgctgaa aagcaacacc acaaagattt ggccctcaat ctggaatctc aaatggtatt 961 ctcacgggat cccgaggctg aagaaataga agctgaatat gctgcattag acaaacgaga 1021 gccatatgaa ggattaaggc ctcaggatct tcgtagacta aaagatatgc ttattgtgga 1081 aactgcagac atgcttcagg ctcctctctt tactgctgaa gctttacttc gagctcatga 1141 ctgggacagg gagaaattac ttgaagcttg gatgtccaac ccggagaact gctgccaacg 1201 atcaggtgtt caaatgccaa ctccaccacc aagtgggtat aatgcctggg acacgctccc 1261 atctccaaga actccaagga ctacacgctc ttctgtcacc tccccagatg aaatcagctt 1321 atctcctggg gatttagaca ccagtttgtg tgacatttgt atgtgcagta tctctgtatt 1381 tgaagaccct gtggatatgc cctgtggaca tgacttttgt agaggatgtt gggagtcgtt 1441 tttgaatctg aaaattcaag aaggtgaagc tcacaacatt ttttgccctg catatgattg 1501 cttccaactt gtacctgtgg atatcataga aagtgtagtt tcaaaggaga tggacaaacg 1561 atacctacag tttgatatta aggcctttgt tgaaaataat cctgccatta aatggtgtcc 1621 tactccaggc tgtgacagag cagtaagact aacgaaacaa gggtcaaata catctggatc 1681 tgatacactc agcttcccat tgctgagagc tcctgctgtt gattgtggaa aaggacacct 1741 cttctgctgg gagtgccttg gtgaagcaca tgagccttgt gactgccaaa catggaagaa 1801 ttggctgcaa aaaataaccg aaatgaaacc agaagaactt gtgggagtta gtgaagccta 1861 cgaggatgcc gccaattgtc tctggttatt aactaactcc aagccttgtg ccaactgtaa 1921 gtctccaata cagaagaatg aaggctgcaa tcacatgcag tgtgctaagt gcaagtatga 1981 cttttgctgg atttgccttg aagagtggaa aaaacatagt tcgtccactg gaggttatta 2041 cagatgtact cgctatgaag tcattcaaca cgtggaggag caatccaagg aaatgactgt 2101 ggaggctgag aaaaaacaca aacgatttca ggaacttgac agatttatgc actattatac 2161 aagatttaaa aaccatgagc atagttatca gctagaacaa cgccttctta aaacagccaa 2221 agaaaagatg gagcaattga gcagagctct caaagaaact gaaggaggct gtccagatac 2281 cactttcatt gaagatgcag ttcatgtgct cttaaaaact cggcgcattc tcaagtgttc 2341 ttatccatat ggatttttct tggaacctaa aagcacaaag aaagaaattt ttgaactaat 2401 gcaaacagac ctagaaatgg tcactgaaga ccttgcccag aaagtcaata ggccttacct 2461 tcgcacaccc cgccacaaga tcatcaaagc agcatgcctt gtacagcaga agaggcaaga 2521 attcctggca tctgtggctc ggggagtagc tcctgcagac tcaccagaag ctccaaggcg 2581 cagctttgct ggtggaacat gggattggga atatttagga tttgcatcac cagaggaata 2641 tgctgaattt cagtatcgga ggaggcacag acaacgtcgt cgaggagatg ttcacagtct 2701 actcagtaat cctccagacc ctgatgagcc aagtgaaagc actttagata ttccagaagg 2761 cggcagcagc agccgcaggc ctggcacatc cgtggtaagt tctgcatcta tgagtgtgct 2821 gcacagctct tccctgcgtg actacacccc tgccagtcgc tctgaaaacc aggactctct 2881 tcaggctctg agttccttgg atgaagacga tcccaatata cttcttgcaa tacagttatc 2941 actgcaagag tctgggctgg ccctcgatga agaaactaga gacttcctca gtaatgaagc 3001 atccttaggt gcgataggca cttctttacc ttccaggctg gactctgtcc ccagaaatac 3061 agatagccct cgggctgcat tgagcagctc tgagcttttg gaacttggtg acagcctcat 3121 gagactagga gcagagaatg acccattttc aactgacacc ctgagctcac accctctcag 3181 tgaggcaaga agtgatttct gtccctcatc tagtgatcct gactcagctg gccaggaccc 3241 caacatcaat gacaatcttc tcggcaacat catggcttgg tttcatgaca tgaaccctca 3301 gagtattgcc ctgattcctc cagcaactac agaaatcagt gcagattccc agctcccctg 3361 tatcaaagat gggtcagaag gtgtgaagga tgtggaactg gtgctgccag aagattcaat 3421 gtttgaagat gccagtgtca gtgaaggtag aggaacccag atagaagaaa atcctttgga 3481 agaaaatatt ctggcggggg aagcagcatc tcaagctggt gacagtggta acgaggcagc 3541 caacagagga gatggttcag atgtttcaag tcaaacacct caaacctcaa gtgactggct 3601 tgaacaagta catttagtgt gaactgcaca catctgggct ctaaatgaat tacaggtaca 3661 gatggtatgc taggtggagt atgcttgata gagactttga ttcacttaat tccaactcag 3721 tgataaacca ctgacattag ggttgaatac agagaagttc ccttgaatgg tagcttcatt 3781 ttttatttta accttacagg gaatttcctt tgtacttaat tgaatagctt ttcccctttt 3841 tgctgacaaa aagaagagca agagaaagag aaacaaaaat gaaataaata agttgtattc 3901 cacactctaa gaaaatgcag tcctctattt agcctaggct tgacaatact taaattgaac 3961 atttaaacta aaggcttact ccctaatctt tgggtggctt tcctttaaaa aaaaaaaaaa 4021 a //