LOCUS BC063843 2354 bp mRNA linear HUM 13-JUN-2005
DEFINITION Homo sapiens chromosome 1 open reading frame 109, mRNA (cDNA clone
MGC:74978 IMAGE:6501461), complete cds.
ACCESSION BC063843
VERSION BC063843.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2354)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2354)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 141 Row: i Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 8923468.
FEATURES Location/Qualifiers
source 1..2354
/db_xref="H-InvDB:HIT000261219"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:74978 IMAGE:6501461"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2354
/gene="C1orf109"
/gene_synonym="FLJ20508"
/db_xref="GeneID:54955"
CDS 292..903
/gene="C1orf109"
/gene_synonym="FLJ20508"
/codon_start=1
/product="C1orf109 protein"
/protein_id="AAH63843.1"
/db_xref="GeneID:54955"
/translation="MTQDRPLLAVQEALKKCFPVVEEQQGLWQSALRDCQPLLSSLSN
LAEQLQAAQNLRFEDVPALRAFPDLKERLRRKQLVAGDIVLDKLGERLAILLKVRDMV
SSHVERVFQIYEQHADTVGIDAVLQPSAVSPSVADMLEWLQDIERHYRKSYLKRKYLL
SSIQWGDLANIQALPKAWDRISKDEHQDLVQDILLNVSFFLEE"
BASE COUNT 640 a 495 c 577 g 642 t
ORIGIN
1 gtgcagtccc tggagggttc tcacgctttg gctgtctgga cttttaagtt tttccgcttt
61 ttcaggaagg cgaccggcag cctcgggcag gggagacagg actgtatgtc agagaagaga
121 cggcgcttgg acgccaggaa tcctctgaag caggagactg ccctatccag gttacccttc
181 ccgaggggaa accagggtct ccttcagaaa gctgaggcag gccgggcgcg gtggctcacg
241 cctgtaatcc cagcactttg gaagaccgag gcgggcggat cacctgagaa gatgactcaa
301 gaccggcctc tgcttgccgt gcaggaggcg ctgaagaagt gcttccccgt ggtggaggag
361 cagcagggcc tgtggcagag tgccctgcgg gactgccagc ccctcctgtc ctccctcagc
421 aacctggcgg aacagctgca ggccgcacag aacctgcggt ttgaggatgt gccggcgctt
481 cgggccttcc cagatttaaa agagcggctg aggcgtaagc agctggtggc tggtgacatc
541 gtcctggaca agctagggga aaggctagcc atcctcctca aggtgcgaga catggtcagc
601 agccatgtgg agcgagtgtt tcagatctat gagcaacacg cagacacagt tggcattgat
661 gctgtcctgc agccttcagc agtgagcccc tctgtggctg acatgttgga atggttgcag
721 gatattgaga gacattatcg aaagtcgtac ctgaagagaa agtatcttct ttcgtctatc
781 cagtggggag acttggcaaa catacaagct ttgcccaagg cctgggaccg aatttcaaaa
841 gacgaacacc aagatcttgt acaagatatc ctattgaatg tttccttctt cctggaagag
901 taaggaagct atgcgtatct ggagaccacg ggtaccacag ttgaagactg acattctgaa
961 ccctgatgtt tctaaagaaa cgtcagtatt tcagtctgac atatttgaaa catcagtgcc
1021 ttgaacctta ggactgggtc ttggggagga ttagcgccta gatgtctgat tttggagctg
1081 cagcatgcca ggccgtggct gagagtatgt gagccatgcc ttgccctttt ctgaggctca
1141 gggaagtgga tggagctaga gagacaacag gaaagacggt gctgaagaac atagtgtctt
1201 tcctctattg tggacctaaa gaggtgggga agcaaggaca agaggcaaag agccacactg
1261 cccttggcat catccaaagc attgtctggt tgacaccagg tcctggtttt gtgtcttttg
1321 tcaatacctg aatccttgac aaaagaaaaa gtggttttga tgatttaaag aaataagggt
1381 gattttgaca gaaaatatat tttaaaaatt ttgaccaatt gcaatagtta tcctcaagcc
1441 aatttccaga acctgccacc agggggaggt ggtgcagcat gaatcattct gaatgctttg
1501 tctttgaagt gttcccctat tgctgttacc atctcagagg aagtaactgg gcatggtgag
1561 actcctaaaa tgacaggagt ttttttggcc aaagctggca tctgacttgc cacattcctc
1621 tgagtctgga gtagccgcag gggtgggaga atgccagccc agagtcagtc catcggggtt
1681 acatttccaa ggtctgctgc cttcatctat gtaatggccg tgttactttc agatctttca
1741 gcttcccaga gtgttgtggg aatcttggtc attgaatgta aagggactta gtaaagggta
1801 tagatatttt tcaaaaatga aaataacttt ttttcttata agtgataagc ttttataaag
1861 atcataggaa aactagaaaa aatgtaaaat gtagaaaatt gtaaaacaaa cttcattaga
1921 gatattttga tagatacctt ttcagtgtct atttacaaat tttttctttt aatatagata
1981 gggtctcact atattgccca gctcactcct gagctcaagg gatcctccca ccatagcctc
2041 ccaaaatatt ggaaatacag gcatgagcca ctgctcctga ccaattcaca aattttttta
2101 aagaacaaac gtgctatcat cgatacatac tgttaggttg tcttttttta aaaaacctaa
2161 tgtaatttgt tcatcttttt atatctgtaa atatagctca acacagttat attctttttg
2221 tgaatgtatt atatctacaa tttacctttt ttcttagatt ttacatgcat tttcccaaat
2281 ctttgtgttt gcctatctgt aaaggtaata cattctgatt acaaaaaatg aaaatgttaa
2341 aaaaaaaaaa aaaa
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