LOCUS BC063835 2615 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens VGF nerve growth factor inducible, mRNA (cDNA clone
MGC:74771 IMAGE:6184764), complete cds.
ACCESSION BC063835
VERSION BC063835.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2615)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2615)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. James R. Lupski
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 141 Row: d Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 17136077.
FEATURES Location/Qualifiers
source 1..2615
/db_xref="H-InvDB:HIT000261211"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:74771 IMAGE:6184764"
/tissue_type="Peripheral Nervous System, dorsal root
ganglion"
/clone_lib="Lupski_dorsal_root_ganglion"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2615
/gene="VGF"
/db_xref="GeneID:7425"
/db_xref="HGNC:HGNC:12684"
/db_xref="MIM:602186"
CDS 200..2047
/gene="VGF"
/codon_start=1
/product="VGF nerve growth factor inducible"
/protein_id="AAH63835.1"
/db_xref="GeneID:7425"
/db_xref="HGNC:HGNC:12684"
/db_xref="MIM:602186"
/translation="MKALRLSASALFCLLLINGLGAAPPGRPEAQPPPLSSEHKEPVA
GDAVPGPKDGSAPEVRGARNSEPQDEGELFQGVDPRALAAVLLQALDRPASPPAPSGS
QQGPEEEAAEALLTETVRSQTHSLPAPESPEPAAPPRPQTPENGPEASDPSEELEALA
SLLQELRDFSPSSAKRQQETAAAETETRTHTLTRVNLESPGPERVWRASWGEFQARVP
ERAPLPPPAPSQFQARMPDSGPLPETHKFGEGVSSPKTHLGEALAPLSKAYQGVAAPF
PKARRPESALLGGSEAGERLLQQGLAQVEAGRRQAEATRQAAAQEERLADLASDLLLQ
YLLQGGARQRGLGGRGLQEAAEERESAREEEEAEQERRGGEERVGEEDEEAAEAEAEA
EEAERARQNALLFAEEEDGEAGAEDKRSQEETPGHRRKEAEGTEEGGEEEDDEEMDPQ
TIDSLIELSTKLHLPADDVVSIIEEVEEKRKRKKNAPPEPVPPPRAAPAPTHVRSPQP
PPPAPAPARDELPDWNEVLPPWDREEDEVYPPGPYHPFPNYIRPRTLQPPSALRRRHY
HHALPPSRHYPGREAQARRAQEEAEAEERRLQEQEELENYIEHVLLRRP"
BASE COUNT 506 a 919 c 868 g 322 t
ORIGIN
1 gcgagctagc cgcccggagc cgcgccgacc cagctgagcc cagcccacgg gacgccagac
61 ctcgaccgtc gctcctaccc cggccaccgc tcggagccga ggcggacgcg tcccgatctt
121 cccctgtccc caccctgccc cgaccctcct ctccacctct cgcgtcgtga caccagctgt
181 ctccggcagc ctcttggtca tgaaagccct cagattgtcg gcttccgccc tcttctgcct
241 tctgctgatc aacgggttag gggcagcacc ccctggtcgc cctgaggcgc agcctcctcc
301 tctcagctct gagcataaag agccggtagc cggggacgca gtgcccgggc caaaggatgg
361 cagcgcccca gaggtccgag gcgctcggaa ttccgagccg caggacgagg gagagctttt
421 ccagggcgtg gatccccggg cgctggccgc ggtgctgctg caggcactcg accgtcccgc
481 ctcacccccg gcaccaagcg gctcccagca ggggccggag gaagaagcag ctgaagctct
541 gctgaccgag accgtgcgca gccagaccca cagcctcccg gcgccggaga gcccggagcc
601 cgcggctccg cctcgccctc agactccgga gaatgggccc gaggcgagcg atccctccga
661 ggagctcgag gcgctagcgt ccctgctcca ggaactgcga gatttcagtc caagtagcgc
721 caagcgccag caggagacgg cggcagcaga gacggaaacc cgcacgcaca cgctgacccg
781 agtgaatctg gagagcccgg ggccagagcg cgtatggcgc gcttcctggg gagagttcca
841 ggcgcgtgtc ccggagcgcg cgcccctgcc gcccccggcc ccctctcaat tccaggcgcg
901 tatgcccgac agcgggcccc ttcccgaaac ccacaagttc ggggaaggag tgtcctcccc
961 caaaacacac ctaggcgagg cattggcacc cctgtccaag gcgtaccaag gcgtggccgc
1021 cccgttcccc aaggcgcgcc ggccggagag cgcactcctg ggcggctccg aggcgggcga
1081 gcgccttctc cagcaagggc tggcgcaggt ggaggccggg cggcggcagg cggaggccac
1141 gcggcaggcc gcggcgcagg aagagcggct ggccgacctc gcctcggacc tgctgctcca
1201 gtatttgctg cagggcgggg cccggcagcg cggcctcggg ggtcgggggc tgcaggaggc
1261 ggcggaggag cgagagagtg caagggagga ggaggaggcg gagcaggaga gacgcggcgg
1321 ggaggagagg gtgggggaag aggatgagga ggcggccgag gcggaggcag aggcggagga
1381 ggcggagagg gcgcggcaga acgcgctcct gttcgcggag gaggaggacg gggaagccgg
1441 cgccgaggac aagcgctccc aggaggagac gccgggccac cggcggaagg aggccgaggg
1501 gacagaggag ggcggggagg aggaggacga cgaggagatg gatccgcaga cgatcgacag
1561 cctcattgag ctgtccacca aactccacct gccagcggac gacgtggtca gcatcatcga
1621 ggaggtggag gagaagcgga agcggaagaa gaacgcccct cccgagcccg tgccgccccc
1681 ccgtgccgcc cccgccccca cccacgtccg ctccccgcag cccccgcccc ccgcccccgc
1741 tcccgcacga gacgagctgc cggactggaa cgaggtgctc ccgccctggg atcgggagga
1801 ggacgaggtg tacccgccag ggccgtacca ccctttcccc aactacatcc ggccgcggac
1861 actgcagccg ccctcggcct tgcgccgccg ccactaccac cacgccttgc cgccttcgcg
1921 ccactatccc ggccgggagg cccaggcgcg gcgcgcgcag gaggaggcgg aggcggagga
1981 gcgccggctg caggagcagg aggagctgga gaattacatc gagcacgtgc tgctccggcg
2041 cccgtgactg cccttcccgg tcccgccccc gcgcgccccc gccgcgcgcg cgcgccggcg
2101 cccccctccg tgttgcccgc tccccctcgg tgtttgcatg cgccccggcc ctgccccttg
2161 gccctgcccc tgtccccggg ctgcgtcggg acctgccaga cccccctccc gggtcctgag
2221 cccgaactcc cagagctcac ccgcgggtga ccgggggcca gcccaggagg gcgggtggtt
2281 tgtgcgagtt cccttgccac gcggggcccc ggccccatca agtccctctg gggacgtccc
2341 cgtcggaaac cggaaaaagc agttccagtt aattgtgtga agtgtgtctg tctccagccc
2401 ttcgggcctc ccacgagccc ctccagcctc tccaagtcgc tgtgaattga ccccttcttt
2461 cctttctctg ttgtaaatac ccctcacgga ggaaatagtt ttgctaagaa ataaaagtga
2521 ctattttatt aggaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2581 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
//